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Information for unigene UN25410
| FASTA Sequence |
| Unigene ID: UN25410 | Length: 1114 |
SSR | | TTACCGCTGAACAGATCATGAAGGCAGGGGCAGTTGATATTGGCAGCTGCAGACACAGTTAACGGTCGAAACTGCACAGCTTACTT
TTCTCTCTGCAGAGGCTTTTGCACAGCAAATGAAATTATATTTGATCATCATATTGCTTGAAAACATTTACACATACAAAAGCAGA
GTCACAATAAGAGCACCAACAGAAAGCTTGTTACATTGATACAGCCATATTACAAGTAAAGACATGGAGGTTGATTGGCTCATCCC
GAAGAACTAGCAGACCTTGCTGTTTCAATGGCTGCAACTAGATCATCATATTTGGCACCCGTAACTTCCTTCACCACTTGGTTATC
CTTCAATATTTTAAAAGTTGGAACCACTCTTATTCCTAGTTCCTTTGCTAATGGCTGCACCAAACCAAAGTTATTATAGCTAAGCA
GCAACAACAGCAAGACACTGGTGTGGAGAAATGAGATCTTAAAGGAGGCAGAAGACAAACCCTGTTTTCAGGGTTGCAGTCAAGCT
TAAGAAACACAACGTCCTCATATTTCTCTGATAAAGCTTTGTACTTAGGAGCAATCACTTTACATGGACCACACCTGCATTTAACA
TACATCTCTTTAGTTGAACCAACAGCAACTTTTGAATTCTCTTAGAAGATTGAGAACATCAGAACTAAAGCATTCATAGATGGACT
CAACAATCAACTGAGCTCTAGGCTACTTCAAGAACCATATAGAAGAAGCAGAAAAGCGGTAATTTAACATACCATTGAGTGTACAT
GTCAAGTACCACAATCTTTTCCCCGGCGGCTTTAACGATGGGCCAGAAGGTATCCTTATCCACTTCCGTCACTTGACCAACACTTA
CATTCACAGTCTCTAAGCTACACCTCACCACAGAGGAGTCTCCCCTTCTCACAGAATCCAGTGAGCAGAACCCAATCCTCGTCGTC
GTCGTCGCCACGCCGGAGTAAGGGATACGACACTGCTTTTTCGCAGCTCCAAATCCACCGGTTGTCGGAGATAAAGCCGTAGGATA
TGGAGCTAGACGGAGAGACAGAGGCATTGTTGAGTTCGGCGAAAGAGTGTCGGAACGATGAAATTGATCAGCTTGTGTGTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| O48897 RecName: Full=Thioredoxin F-type, chloroplastic; Short=Trx-F; Flags: Precursor | 464 | 5e-044 |
| XP_002884335 thioredoxin F-type 1 [Arabidopsis lyrata subsp. lyrata] | 443 | 1e-041 |
| NP_186922 thioredoxin F1 [Arabidopsis thaliana] | 442 | 2e-041 |
| AAD35003 thioredoxin f1 [Arabidopsis thaliana] | 442 | 2e-041 |
| XP_002873774 ATF2/TRXF2 [Arabidopsis lyrata subsp. lyrata] | 336 | 3e-029 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O48897 Thioredoxin F-type, chloroplastic | 464 | 2e-045 |
| Q9XFH8 Thioredoxin F1, chloroplastic | 454 | 3e-044 |
| Q9XFH9 Thioredoxin F2, chloroplastic | 319 | 1e-028 |
| P29450 Thioredoxin F-type, chloroplastic | 184 | 6e-013 |
| O81332 Thioredoxin F-type, chloroplastic | 171 | 2e-011 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| C6SZV5 Putative uncharacterized protein | 193 | 8e-013 |
| B9RM61 Thioredoxin f-type, putative | 191 | 1e-012 |
| C6SWF1 Putative uncharacterized protein | 190 | 2e-012 |
| B7FGW0 Putative uncharacterized protein | 188 | 3e-012 |
| A9NPJ8 Putative uncharacterized protein | 181 | 2e-011 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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