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Information for unigene UN25425
| FASTA Sequence |
| Unigene ID: UN25425 | Length: 1315 |
SSR | | CCCTAGTCGTCGTCGTCGTCGTCGGCTCTGTTACTCCGCCGTCCTCGTGTAGGAAACCCAGGTTCTTCAGCTAACGACCAATCAAA
CTTGTGATGGCTTCAGCTTCACCGACGGAGAACGGCGGCGTAAGTAAATTGGAGAAGTTTCTGTGCGAGCGATTGTTGGATCAGTC
GCAGCCGATCTCAGAGCGGTTTAGAGCTCTCTTCTCTCTTCGCAACTTGAAAGGCCCTGCTCCTCGCAACGCTCTAATCCTCGCAT
CCAGAGACTCATCCAACTTGTTGGCACATGAATCTGCTTTTGCGTTGGGACAGATGCAAGATGCTGAAGCTGTTCCTGCTCTTGAG
TCTGTTCTTAATGATATGTCTTTGCATCCTATAGTACGCCATGAGGCAGCAGAAGCTCTTGGAGCCATTGGTTTAGCTGGTAATGC
TGAGATATTGAAGAAAAGCTTGATCTTGGATCCTGCTCAGGAGGTTCGGGAGACATGTGAGTTAGCTCTCAAGAGGATCGAAGAGC
TGAGTAGTGTTGTTGATGCGGAGAAGAACCAGTCAGACACGACAGAGAGATCACCTTTCATGTCTGTTGACCCAGCGGCTCCGGCT
GCTGCTTTCTCCTCTGTCCACCAACTGAGAGAGATTCTTATGGATGAAACAAAAGGCATGTATGAGAGATATGCTGCTCTTTTCGC
TCTAAGGAATCATGGTGGAGAGGAGGCTGTTTCTGCTATTGTTGATTCTTTGAGTGCTGATAGTGCCCTTCTACGTCATGAGGTTG
CTTATGTCTTGGGGCAATTGCAAAACAAAGCTGCTTTAGCTACTCCAAGCAAAATACTTAGAGATTTGAAAGAGCACCCAATGGTT
AGACACGAGGCTGCAGAAGCGCTTGGTTCTATTGCAGATGAGCAGAGCATCGCATTGCTACAGGAATTCTCAAGGGACCCTGAGCC
GATTGTTTCGCAAAGCTGTGAAGTTGCATTGAGCATGCTGGAATTTGAAAATTCCGGCAAATCATTTGAGTTCTTTTTCACTCAAG
ACCCGCTTGTTCATTAAGAATGCGTAAGGATCTTAACCATTCTTCGATCATTTACCAACAAGGGAAGGAACATAAGCTTTTGCAGC
CTTTTGTTGCCTTTTGTTATACAGAGAGATTGGATTGCTTGCTACTTAGCATCTTATTTATGTACGATTGTTACAATAACTATCTA
TATTGAGTTTAAGTTTAAGATACCATTGTCTTAGTCGGTACGGAAGCTTTCCATTGTTAAAGAAAGGGAATGATTTTGCATGTCTT
CTAATTTCTACCATTTCGTTGATGC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_567062 deoxyhypusine hydroxylase [Arabidopsis thaliana] | 1367 | 1e-148 |
| XP_002876460 hypothetical protein ARALYDRAFT_907292 [Arabidopsis lyrata subsp. lyrata] | 1364 | 3e-148 |
| CAB68156 putative protein [Arabidopsis thaliana] | 1273 | 9e-138 |
| XP_002302059 predicted protein [Populus trichocarpa] | 1177 | 1e-126 |
| XP_002263238 PREDICTED: hypothetical protein [Vitis vinifera] | 1172 | 5e-126 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q94JW0 Deoxyhypusine hydroxylase | 1367 | 5e-150 |
| Q2QXB3 Deoxyhypusine hydroxylase-A | 1046 | 8e-113 |
| Q2QLW3 Deoxyhypusine hydroxylase-B | 1041 | 3e-112 |
| Q5ZIP3 Deoxyhypusine hydroxylase | 656 | 1e-067 |
| Q5PPJ4 Deoxyhypusine hydroxylase | 655 | 2e-067 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9DGP9 AT3G58180 protein | 1367 | 8e-149 |
| B9GS37 Predicted protein | 1177 | 8e-127 |
| B9S4W3 Lyase, putative | 1164 | 3e-125 |
| B9H8J8 Predicted protein | 1154 | 4e-124 |
| C6TNQ0 Putative uncharacterized protein | 1134 | 8e-122 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G58180.1 PBS lyase HEAT-like repeat-containing protein | 1368 | 3e-151 |
| AT3G62530.1 PBS lyase HEAT-like repeat-containing protein | 402 | 3e-039 |
| AT3G43260.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: PBS lyase HEAT-like repeat-containing protein (TAIR:AT3G62530.1); Has 43 Blast hits to 39 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). | 142 | 5e-009 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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