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Information for unigene UN25426
| FASTA Sequence |
| Unigene ID: UN25426 | Length: 1398 |
SSR | | GGAGAAGAAAAGTCTGCCTCTCTTCTTAAGACGTAAGCATCACAATCTCTACGAACAAGATAGAATATCCTCAAGCTTCTGCTTCT
TCGTCTTCCATCATCTGAAGATTGAACTCTTCTCTAATCTTCTGTGGTTTATCTTGAAAGAGTTGTGCAAGTTCGTGTAAGAGACA
GAAGCGTAATGAGCTGCTTTGGTTGTTGTGGCGATGATGATTTCCATAGAGTTAATGAAACAGGACCAAAGACAGCGCATAACATA
GCAGGTTACGATGGTCACCATCAAAGGGTTGAACCATTCAAGAACCCGCCAGTCATTCAGATGCAACCTGTAGCTGTACCAGCCAT
CCCAGCGGATGAGTTAAAGGACATAACCGATAACTATGGGCCAAAGTCATTGATTGGTGAGGGTTCATTTGGAAGAGTGTTTTACG
GTGTTCTGAAAAACGGTAAGGCAGCTGCCATTAAGAAACTTGATTCCAGTAAGCAACCGGATAACGAATTTCTCTCCCAGGTTTCA
ATGGTTTCGAGATTGCGAAACGACAATGTTGTTGCTCTTCTGGGATATTGCGTTGATGGACCACTCCGTGTTCTTGCTTATGAATA
TGCTCCTAATGGATCTCTTCATGATATCCTTCATGGTAAAAAAGGTGTGAAAGGAGCACAGCCAGGTCCTGTTCTGCCATGGCACC
AGAGAGTAAAAATTGCGGTTGGTGCGGCTAAAGGACTAGAGTACTTGCATGAGAAGGCAAACCCTCATGTAGTCTACCGAGACATC
GAATCCCGCAGTGTACTTATGTTTGAAGATGATGTTGCTAAGATTGCTGATTTTGATCTGTCCAATCAAGCCCCTGACATGGCTGC
ACGCCTTCACTCAACTCGTGTGCTTGGGACCTTTGGTTATCACGCTCCAGAGTATGCAATGACAGGAACGTTGAGCACAAAGAGTG
ATGTGTATAGTTTTGGGGTTGTTCTGCTAGAGCTCCTCGCAGGTCGTAAACCAGTTGATCATACTTTACCAAGAGGACAGCAGAGT
CTCGTGACTTGGGCAACCCCTAAACTGAGTGAAAACAACGTGAAGCAGTGCGTTGATGCAAGACTAAACGGAGAGTATCTTCCTAA
AGCTGCTGCCAAGATGGCAGCTGTAGCTGCGCTTTGTGTGCAATATGAGGCAGAGTTCAGGCCAAACATGAGCATAGTAGTGAAGG
CTCTTCAGCCTCTACTCAATCCTCCTCGCTCTACTCCTCAGACTCCACAGAGAAATATCCCTTATTGATGTCACACTTCATTTGTT
TTTGTTTAATTATGAATATGATTGTGTAAATTCGTGAAATAGCCCTTTATATTTCTCTCGTAAAAGGATATATATATATATACAAG
AAACTGTATCATTTTCTTACAG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002883060 hypothetical protein ARALYDRAFT_479217 [Arabidopsis lyrata subsp. lyrata] | 1682 | 4e-185 |
| NP_188367 putative serine/threonine protein kinase [Arabidopsis thaliana] | 1658 | 2e-182 |
| NP_175255 serine/threonine protein kinase [Arabidopsis thaliana] | 1550 | 7e-170 |
| AAK96869 similar to Pto kinase interactor 1 gb|AAC61805.1 [Arabidopsis thaliana] | 1544 | 4e-169 |
| ACB30366 Pto kinase interactor 1 [Capsicum annuum] | 1459 | 3e-159 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q41328 Pto-interacting protein 1 | 1458 | 1e-160 |
| O80719 Probable receptor-like protein kinase At2g47060 | 1401 | 6e-154 |
| P93749 Probable protein kinase At2g41970 | 1109 | 4e-120 |
| Q3EDL4 Probable serine/threonine-protein kinase At1g01540 | 545 | 1e-054 |
| Q9SJG2 Probable receptor-like protein kinase At2g42960 | 542 | 2e-054 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9LUT0 Putative uncharacterized protein At3g17410 | 1658 | 2e-182 |
| Q93Y19 Similar to Pto kinase interactor 1 | 1544 | 3e-169 |
| B2CZJ8 Pto kinase interactor 1 | 1459 | 2e-159 |
| Q9LNH4 F21D18.6 | 1450 | 2e-158 |
| B9RN61 Serine/threonine-protein kinase PBS1, putative | 1401 | 1e-152 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G17410.1 serine/threonine protein kinase, putative | 1660 | 5e-185 |
| AT1G48210.1 serine/threonine protein kinase, putative | 1552 | 2e-172 |
| AT1G48210.2 serine/threonine protein kinase, putative | 1552 | 2e-172 |
| AT2G47060.1 serine/threonine protein kinase, putative | 1401 | 5e-155 |
| AT2G47060.2 serine/threonine protein kinase, putative | 1401 | 5e-155 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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