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Information for unigene UN25428

FASTA Sequence
Unigene ID: UN25428Length: 634 SSR 
GGGAACATCCATTACTAAAAGAAGGAAAAACAATAAAAATATGTTTCGTTTTACAATAATCCTGATCCTTTTAAGCATATACACAC
AACAAGCGATAGGATCGTCGTTCTTTCTCTATAACCAGGTGCGCCATGGAATCCTAATGAAAGTCCATTGCAAATCAAAAGACAAC
GATATGGGATGGCACGTGAGGAAATACGGAGGAAGTTCCGGTATTGATTTCAAGGATCATATACTTGATAAAACACTTTATTGGTG
CAACATCTGGTCAGGTCCTAATTTCAGTCTTAATGCGTCTATCGTCACGTACGAAAGTAAGCTGTATGAACACAAAAACAATTGGA
TAAGATGGTCTATAAGGGGAGATGGTATTTATGAATCTATCAATGGTGCAACGCCTTGGAAATTCAAGTATCATTGGTATGGAAAA
ACTTTTAAATAAGGTCATCATGATCTCTTTTATGTTCATATATACTATATATATATATATGTGTGTGTTTTGTATGTTTCTCAACT
AATTGTGTATTAATGTGACATTGGTATTATGATTCATTCGACGGAATATCTAAGAGTCAACCCTGATAAATGTATATACTCACAGA
AGGGTTGATTTACCTGTCAACTAGTATTTTTA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002882673 hypothetical protein ARALYDRAFT_478378 [Arabidopsis lyrata subsp. lyrata]3701e-033
NP_187657 self-incompatibility S1 family protein [Arabidopsis thaliana]3549e-032
NP_001031830 self-incompatibility S1 family protein [Arabidopsis thaliana]2142e-015
XP_002871088 hypothetical protein ARALYDRAFT_908319 [Arabidopsis lyrata subsp. lyrata]2105e-015
NP_196055 self-incompatibility S1 family protein [Arabidopsis thaliana]1943e-013

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9CAE8 Putative uncharacterized protein F13M14.263546e-032
Q2V3A2 Putative uncharacterized protein2141e-015
Q3E9M1 Putative uncharacterized protein At5g04350.11942e-013
Q9LW22 Gb|AAD30245.11621e-009
A5B7G4 Putative uncharacterized protein1379e-007

Arabidopsis top hits (Blast detail)Scoree value
AT3G10460.1 self-incompatibility protein-related3544e-034
AT5G04347.1 LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Plant self-incompatibility S1 (InterPro:IPR010264); BEST Arabidopsis thaliana protein match is: self-incompatibility protein-related (TAIR:AT5G04350.1); Has 81 Blast hits to 81 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 81; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).2147e-018
AT5G04350.1 self-incompatibility protein-related1942e-015
AT5G38435.1 SPH8 (S-PROTEIN HOMOLOGUE 8)1663e-012
AT3G26880.1 self-incompatibility protein-related1628e-012

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
63  75%
 
121  25%

Unigene MembersMember information