Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN25446

FASTA Sequence
Unigene ID: UN25446Length: 828  SNP
GGTTTTCCCGTTTATTATCCCCAACAAAGGCATTCTCGTTTGTTCTTCTGTAATACCGCTTCTATTGTTCCCTCCTTTCACAAGGA
AGGGCGTAGAAGAATCCACCATTACAGTTCTATAACTGTAAAAGAAAACCTTTAAATCTCATCATCAAACAAACACAAAAGGAAGC
TAAATGGGTATCAAGTTCTTGTTGATCCTTTGCCTCTTGACCCTGGCAGTAGTCGCTGAATCAGCCAATGTCACATGGTCCTTGTC
CAAATCTTGTGTCAATGGACAAGGATGCATTGGAGACGATGATGGACTTGAGTCCTTGATGGATTCTGAGACCAATAGGCGGCAAC
TAGCCGCAAGGCGCAGGTACATCAGTTACGGTGCACTTAAGAAGAACAATGTGCCATGTAGCCGTCGTGGCCGGTCTTACTACGAT
TGCACGAAGAGGAAAAGGGCTAACCCTTACAGGCGTGGGTGCAGCATCATCACGCATTGCTACAGGCTAACTTCTTAATCTGAATC
AGCACATACAAACAATATGAGTAACGAAGCGAGAGTGCAAAGAATGCGTAAATAAATAAAGATCACATGTTTCCTCTACGTACGAT
TTTGAACTTTGTTTTTCTTGATATGATCTTTAATTTTTATTTTCCCTTTTATTTATGCTCATGATGCATATACGCTCAGTTTATCT
GTTGGTATCCTTTTATATTTCTCAACATTGTGTTTCGTTTATGTCTATATGTAAGCAATACCTTGTGATCTACATCGATTTCAATT
TGAGTATGTTGACGTACTTTATAGTCATTTAACAATTAATGTGTTTACACAAAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002879470 hypothetical protein ARALYDRAFT_902453 [Arabidopsis lyrata subsp. lyrata]5055e-049
NP_850219 ralf-like 19 protein [Arabidopsis thaliana]5046e-049
BAD94374 hypothetical protein [Arabidopsis thaliana]4974e-048
NP_174148 protein ralf-like 4 [Arabidopsis thaliana]4527e-043
XP_002280202 PREDICTED: hypothetical protein [Vitis vinifera]2861e-023

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q6NME6 At2g337755044e-049
Q56ZP5 Putative uncharacterized protein4973e-048
Q9FZA0 F3H9.8 protein4525e-043
C6T004 Putative uncharacterized protein2761e-022
A5AP06 Putative uncharacterized protein2681e-021

Arabidopsis top hits (Blast detail)Scoree value
AT2G33775.1 RALFL19 (ralf-like 19); signal transducer5052e-051
AT1G28270.1 RALFL4 (ralf-like 4); signal transducer4523e-045
AT3G16570.1 RALFL23 (ralf-like 23); signal transducer2231e-018
AT3G05490.1 RALFL22 (ralf-like 22); signal transducer2094e-017
AT4G15800.1 RALFL33 (ralf-like 33); signal transducer2094e-017

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
63  30%
 
124  40%
 
113  30%

Unigene MembersMember information