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Information for unigene UN25457
| FASTA Sequence |
| Unigene ID: UN25457 | Length: 950 |
| SNP | GAACATTGTCTAAACGAGTGAAAACTAAACAGGGTCTCGAGTTTCATAACAAGTTCCAAATGTTTTACAAGAGCAAGAACCATCAG
TTTTTTTTTGTCCAACTAGGCAGAAAAGTAAAAAGATAGTAATGAGATTCAACTCCAGGTTTGTTGGGCGACCAAAGTGAAAAGTT
TTACTCGACCTCAGCCAAGTAATCGTCGATCTCTGCCGGTGTTAGTACCCTAAAGACTTTGTCAGCGCCAATCTTGCCAATCTCAA
TGTTCTTGCTCGAGATTTCTCCCTCGAAACCTTCCTTCAGTGTCAATATAGCCGTATGAATCGCATCATCAAGCTCCATATCTTCA
GTGTACCTCTTCTCGAGAAATGTCTTGGCATTCGAAACATTCTTCCCCATTGCCGAAGCTTTCCATGAGAAATAGGAACCAGACGG
ATCCACCTGGTACAGCTGTGGGCCCTTGTCATCATACCCAGCCACGAGTAGAGAAACTCCAAACGGCCTAACACCACCTGATTGAG
TGAACTCTTGCATGACCGTAGCCGTTTCCCTCACAAGTTGAGTGACAGGGATAGGTTCTTTGTACAAGCGGAGATACTGCTCAGCC
TGCTTCCTACTCTTTCGCACAAGAACTCGGAAATCAGGGCCCATACCACTGTATACAACTCCAATGTTGGGAGTCAAATGCTGAAT
CTTTTGAACAGAGGCTTCATCAACAAGAATAGAGGGAAGCTTCTTTTCAGTAGCAATAACAACTCCATTTGAAGCTTTGATTCCCA
GAGATGTCTGGCCTGATCCAACAGCTGTTAGAGCATGCTCTATCTGAACCAGCTTTCCTGAAGGGCTGAAGGTAGTGAGTGAAAAC
GAGTACTGACTGTCTCCCATTGCAATCCCTTTGATGTTACGGATCGAGGTAACGACGATAATGGAGAGACGAGGAAGGAAGGAGCC
AAGT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_173096 proteasome subunit alpha type-2-A [Arabidopsis thaliana] | 1182 | 2e-127 |
| XP_002889236 hypothetical protein ARALYDRAFT_895825 [Arabidopsis lyrata subsp. lyrata] | 1178 | 6e-127 |
| XP_002890168 hypothetical protein ARALYDRAFT_471845 [Arabidopsis lyrata subsp. lyrata] | 1178 | 6e-127 |
| NP_178042 proteasome subunit alpha type-2-B [Arabidopsis thaliana] | 1174 | 2e-126 |
| XP_002513374 proteasome subunit alpha type, putative [Ricinus communis] | 1132 | 1e-121 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O23708 Proteasome subunit alpha type-2-A | 1182 | 9e-129 |
| Q8L4A7 Proteasome subunit alpha type-2-B | 1174 | 7e-128 |
| A2YVR7 Proteasome subunit alpha type-2 | 1074 | 3e-116 |
| Q10KF0 Proteasome subunit alpha type-2 | 1074 | 3e-116 |
| Q54DM7 Proteasome subunit alpha type-2 | 823 | 4e-087 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9RI05 Proteasome subunit alpha type | 1132 | 8e-122 |
| A9PAG0 Proteasome subunit alpha type | 1125 | 5e-121 |
| C6TH59 Proteasome subunit alpha type | 1117 | 5e-120 |
| Q38M52 Proteasome subunit alpha type | 1105 | 1e-118 |
| C6TKI4 Proteasome subunit alpha type | 1104 | 1e-118 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G16470.1 PAB1 (PROTEASOME SUBUNIT PAB1); endopeptidase/ peptidase/ threonine-type endopeptidase | 1183 | 6e-130 |
| AT1G16470.2 PAB1 (PROTEASOME SUBUNIT PAB1); endopeptidase/ peptidase/ threonine-type endopeptidase | 1183 | 6e-130 |
| AT1G79210.1 20S proteasome alpha subunit B, putative | 1175 | 5e-129 |
| AT1G79210.2 20S proteasome alpha subunit B, putative | 1175 | 5e-129 |
| AT1G79210.3 20S proteasome alpha subunit B, putative | 1175 | 5e-129 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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