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Information for unigene UN25459

FASTA Sequence
Unigene ID: UN25459Length: 681 SSR 
GGGCGAGAGAGAGAGAGATGGCTGAAACAGCGAGAAGACAAGGTGGTGGTGGGAGGCCGTTTCCACCGCCTCCTCCGAGAGGCGTT
AATCAACTCCCTCGCCCTAAAGCCGAACCTGTCGATCGCGAGAAGACGTGTCCTTTGCTTCTTCGTGTGTTCACCAAGAGTGGTGG
TCATCATACTAAGGAAGATTATGCTGTGAGGGGCAAAGAGCCAAAGGACGAAGTTCAGATTTACACTTGGAAAGATGCCAATCTTC
GCGAGCTAACGGATTTGGTCAAAGAGGTTTCTGTGGCAGCTAGGAGAAGAGATGCGAGATTATCGTTTGCGTTTGTTTATCCAGAC
AAGAATGGCCGCTTTATTGTGAGACAGGTTGGTCAGACGATGTCTTATCCAAACCGAAAACAACCAGACGACAGTAAAACACTCGC
CGACCTTCATTTCGAGATTGGAGATTATCTGGATGTGGCAATCTACTAGGAGGAGGAGGTTTCTGTTTTTTCCTCGAGTAACATTT
AGGGGTGTGTGCACAAAGGAAAATAACAAATTCATAGTTGTTCCCATTCCTTTTTTGTTTTTGTTTTTTAACAACAGTTGTTCCCA
TTTCAAAACTTTGTTTAGACACATATTATGTATCCTTGGATCTGGTCTGTGCACAACTGGTTTAGCCATAACTTTTTTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002882023 hypothetical protein ARALYDRAFT_904009 [Arabidopsis lyrata subsp. lyrata]6811e-069
NP_566050 histone deacetylase complex subunit SAP18 [Arabidopsis thaliana]6641e-067
AAM67239 sin3 associated polypeptide p18 [Arabidopsis thaliana]6586e-067
NP_001189753 histone deacetylase complex subunit SAP18 [Arabidopsis thaliana]6272e-063
XP_002277566 PREDICTED: similar to Os02g0122000 [Vitis vinifera]5573e-055

Swiss-Prot top hits (Blast detail)Scoree value
O64644 Histone deacetylase complex subunit SAP186646e-069
Q3T022 Histone deacetylase complex subunit SAP183205e-029
O00422 Histone deacetylase complex subunit SAP183205e-029
Q5RDT5 Histone deacetylase complex subunit SAP183205e-029
O55128 Histone deacetylase complex subunit SAP183196e-029

TrEMBL top hits (Blast detail)Scoree value
Q6V9I5 P185501e-054
B9GPT2 Histone deacetylase complex protein5393e-053
C6T2R6 Putative uncharacterized protein5374e-053
B9RDH5 Histone deacetylase complex subunit SAP18, putative5341e-052
A2X0A2 Putative uncharacterized protein5213e-051

Arabidopsis top hits (Blast detail)Scoree value
AT2G45640.1 SAP18 (SIN3 ASSOCIATED POLYPEPTIDE P18); protein binding / transcription regulator6701e-070

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
73  75%
 
81  25%

Unigene MembersMember information