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Information for unigene UN25467

FASTA Sequence
Unigene ID: UN25467Length: 1078 SSR 
GGAAGTGTTGATCTTTAGACGAGTTATGGGGAAAGAGAGCAGCAAAGCCTCGAGCTTGAAAGCAGAGCAGAAAGTGATTGTTCTCC
GTTCGGTCGCTCAGTACTTGGATCGATGTGGGTTTTCTAAATGCTTCAAGAAGCATCTCTCGGAAGCTGAAATCGAGAAGAAGGAA
TTGAACAGTAGCTTACCGGATATAGAGGAAGTTTTCTGCGATTTTTTTAACAAGAGCCATGTTGAAAAATCTGGTGATGATAATGA
GGATGGGAAGAAGAAAGCAGCAAGTGTAGATGAGAATGCATCTGTTGATCACGAAAAGGACGAGAAGAAAGATAAGAAGAAGAAGA
AAAAGAAGGAACCAAAATTGGAGGAGGAGAATGTCAAGGAGACTGATGCTGAGATGAAGACGAACTGAAAGAGAAAAAGAAGAAGA
AGAAGAAAACCAATTCTGAGTCTTTGGTTGAAGATGAGGAGGATAAGGAGAAATCCTCCAAGAAAAGGAAAAGATCAGAGCCTGAA
GAGACTAAAGAAGAGACCGAGGAGGATGATGATGATGATGAGGGATCAAAACGGAGGAAGAAGGAAGTGGAAGAAACGCCTGTCAA
GCAGCAGGCTGATGATGTTCAGGAAAACGGTAACGTTGAGAAAAGCGAAAAGAAATCAGGAAAAGCCCTTACTAACTCTAAAGAAC
CGAAGAAACCGTTTCAGAGAGTGGACGTTGAAGAGGTTGTCTTCACTGACGAGAGGCTTAAAGATAACTCTTACTGGGCAAAGGAT
GGTGCTGATTCGGGTTATGGTGCTAAAGCTCAAGAGGTTTTAGGTCAAGTCAGAGGAAGGGGTTTCCGACATGATAAGACGAAGAA
GAAACGTGGTAGCTACAGAGGAGGAGAGATCGATCTTCAGTCACATTCGGTTAAGTTTGAGTACTCAGACGATGAATGATGATCAA
TTGATAAGCAATACACTTGTCTTTATCTTTGTTTCTCTTTTTAAATTATTATCACCATCTCTTTCTTTTGCCTTGCTTATCTCAAA
ATGTAAGACTATTCGGATCTAATTAACCCGGAACTGGGTTCAAGTG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002866185 hypothetical protein ARALYDRAFT_495806 [Arabidopsis lyrata subsp. lyrata]5882e-058
NP_200522 uncharacterized protein [Arabidopsis thaliana]5658e-056
AAM61154 unknown [Arabidopsis thaliana]5658e-056
AAK74044 AT5g57120/MUL3_6 [Arabidopsis thaliana]5532e-054
XP_002325253 predicted protein [Populus trichocarpa]4861e-046

Swiss-Prot top hits (Blast detail)Scoree value
P41777 Nucleolar and coiled-body phosphoprotein 12519e-021
Q14978 Nucleolar and coiled-body phosphoprotein 12267e-018
P32583 Suppressor protein SRP402178e-017
Q55FI4 Nucleolar protein 581641e-010
P36044 Protein MNN41622e-010

TrEMBL top hits (Blast detail)Scoree value
Q8LFX8 Putative uncharacterized protein5656e-056
Q9LU74 AT5g57120/MUL3_65656e-056
Q93WC7 AT5g57120/MUL3_65531e-054
B9IN49 Predicted protein4868e-047
B9HAX3 Predicted protein4733e-045

Arabidopsis top hits (Blast detail)Scoree value
AT5G57120.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif (InterPro:IPR006594), SRP40, C-terminal (InterPro:IPR007718); Has 90949 Blast hits to 45608 proteins in 1620 species: Archae - 300; Bacteria - 8281; Metazoa - 37603; Fungi - 8095; Plants - 3374; Viruses - 548; Other Eukaryotes - 32748 (source: NCBI BLink).5781e-059
AT4G37820.1 unknown protein1702e-012
AT3G28770.1 unknown protein1471e-009
AT1G56660.1 unknown protein1343e-008
AT3G57150.1 NAP57 (Arabidopsis thaliana homologue of NAP57); pseudouridine synthase1325e-008

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
104  100%

Unigene MembersMember information