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Information for unigene UN25505
| FASTA Sequence |
| Unigene ID: UN25505 | Length: 1469 |
| SNP | GGACTAAACTCCATAGTTCTCTTCTTCTACTTCACCATCTTCCTGGCAAACATGGCTCCATCTACGAAGACGGTTTTGATCCCTAT
TGCGCACGGTACGGAGCCTCTAGAAGCGGTGGCGATGATCACCACGTTACGGCGAGGTGGCGCTCACGTGACGGTGGCGTCCGTCG
AGACTCAGGTTGGCGTCGATGCTTGTCATGGTATCAAGATGGTCTCTGATACTCTCCTCTCTGATATTACCGATTCTATTTTCGAC
CTTATTGTGCTCCCTGGAGGGCTTCCGGGAGGCGAGACTCTAAAAAACTGTAAACCATTAGAGAATATGGTAAAGAAACAAGACGC
AGATGGACGACTTAACGCAGCTATATGTTGTGCTCCTGCGTTGGCCCTTGGTACTTGGGGTCTACTACAAGGCAAAAAAGCAACGG
GTTACCCGGTTTTTATGGAAAAACTTGCTGCTACTTGTGCCACTGCTGTTGAGTCAAGAGTGCAGATAGATGGAAGAATAGTGACC
AGTCGTGGACCGGGGACCACCATAGAATTCTCCATCACGCTTGTAGAGCAGTTGTACGGGAAAGAGAAAGCTGATGAAGTCTCTAG
TATCTTGCTGGTTCGTCCTAACCCTGGCGAGGAATATACTTTTACTGAGCTTAACAAAACAGAGTGGTTATTTGAAGATACGCCAC
AGATTCTTGTACCCATTGCAGAGGATTCAGAGGAGACTGAAGCTATAGCCCTTGCAGATATCCTGAGGCGGGCAAAAGCAAATGTG
GTGATTGCTGCAATTGGTAATAGTTTGGAAGTTGTAGGATCATGCAAAGTTAACCTAGTAGCAGATGTGCTTCTTGATGAGGTTTC
AGAGAAGTCATTCGATCTGATTGTGCTGCCTGGCGGTAATGGTGCTCAAAGATTGGCAAGCTGTGAGACACTGGTGAATATGTTAA
AGAAACAGGCAGAAGCAAACAAACCATACGGAGGAATCTGTAAAGCGTCTGTATACGTCTTTGAGTCTAATGGTTTACTCAAGGGT
AAGAAGGCTACTACTCATCCAAGGGTGAGCAACGAGCTTTCAGACCAGAGTCACATTGAGCACAGAGTCGTGGTTGACGGAAACGT
CATAACGAGCAGAGCTCCAGGGACTGCAATGGAGTTTTCACTTGCGATTGTGGAGAAGTTTTACGGCCGAGAGAAAGCGCTTCAGC
TTGCAAAGGCAACGCTTGTTTGAGAAGCTTCAGCCTTTGAGAAGTTGTTATGTATCTCTCCTGGTGAGATGAGTTACTTTGTAATA
TGAGCTAGTGTTTGTGTGTGTAATTTCTGTCTTATCTATACTATTATTTGCGAACTGATTTTTCGTGACAGGAGCTCTCACTTTAA
AAATTAGACTGGTTAATATGTTTATATACTTAATAAATAAAATATAAAAATAATGTAAAAATCAAGGAAAAAATGAAAATAAATTT
ATTTGAT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002882906 hypothetical protein ARALYDRAFT_478924 [Arabidopsis lyrata subsp. lyrata] | 1792 | 7e-198 |
| NP_188117 class I glutamine amidotransferase domain-containing protein [Arabidopsis thaliana] | 1773 | 1e-195 |
| AAP96742 ThiJ-like protein [Brassica rapa subsp. pekinensis] | 1766 | 7e-195 |
| NP_850588 class I glutamine amidotransferase domain-containing protein [Arabidopsis thaliana] | 1673 | 4e-184 |
| NP_564626 4-methyl-5(b-hydroxyethyl)-thiazole monophosphate biosynthesis [Arabidopsis thaliana] | 1559 | 7e-171 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9FPF0 AT3G14990 protein | 1773 | 8e-196 |
| Q7XBC0 ThiJ-like protein | 1766 | 5e-195 |
| Q9LKA6 Emb|CAA17570.1 | 1673 | 3e-184 |
| Q9MAH3 F12M16.18 | 1559 | 5e-171 |
| Q8LGH3 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis protein, putative | 1553 | 2e-170 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G14990.1 4-methyl-5(b-hydroxyethyl)-thiazole monophosphate biosynthesis protein, putative | 1774 | 3e-198 |
| AT3G14990.2 4-methyl-5(b-hydroxyethyl)-thiazole monophosphate biosynthesis protein, putative | 1674 | 1e-186 |
| AT3G14990.3 4-methyl-5(b-hydroxyethyl)-thiazole monophosphate biosynthesis protein, putative | 1674 | 1e-186 |
| AT1G53280.1 DJ-1 family protein | 1560 | 2e-173 |
| AT4G34020.1 DJ-1 family protein | 791 | 3e-084 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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