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Information for unigene UN25509

FASTA Sequence
Unigene ID: UN25509Length: 722 SSR 
GGGTATAAACCTCTGTGGCTGCCGGTCATTTATCTCTCTCTCTCTCCCTTCCTCTAAGCTAAAGCCAAAACATAACAAGAATAAAA
GCTATGGCTGGTATGCTTCCAGGAGTTGAGTGCGCGAGGAGGCGGCGCTTCCACGGCGGTGCTCCACCGATTGACTTATCCAACAC
GGCTTCTGTGGCTGCAGCAACGGGACACGTATGGACTCGCCGACCATCCTTCTCTCTCTACACTACCAATCACGAGAGTCACCAAG
CCTATGTCTCCTTCTCGGAGAGAAATATTAGGAACAAATCTTACGGTGTTGATAACCATGAGAAGCTTGTAGGAGCAGCCAAAGAG
GCGAAAGATAGATTGGACGAGCGGCTGAGAAACCCGCGAAGAAGAGGCAAAATGACAAAGACAAAGTGAATAAATTGGAGCAAGGG
AAAGGTAAATCTCTCAAGGATTTACCGACAGAGGTGGTTGGGTTAAAGAAGAGCCGGAGAAGGCTTGTCAAATGGTTCGGGTGGCG
AGTAAAGGAGCAACAAGAGTGTGCTATATGTCTAGACCAGTTCAAGACGGGTGAGACATTGGTCCACCTACCATGCACCCATAAGT
TTCACTCCATATGTTTATTGCCTTGGCTAGATACCAACGTGTATTGCCCTTATTGTAGAATGGACATTTGGAATTAATTGTAATAA
TTTAATGTCATATCATTAGGTCTTGTTTACGGCT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_001189531 RING/U-box domain-containing protein [Arabidopsis thaliana]5332e-052
XP_002883903 zinc finger family protein [Arabidopsis lyrata subsp. lyrata]4633e-044
NP_565376 RING/U-box domain-containing protein [Arabidopsis thaliana]4606e-044
XP_002266080 PREDICTED: hypothetical protein isoform 2 [Vitis vinifera]2653e-021
ACU16694 unknown [Glycine max]2601e-020

Swiss-Prot top hits (Blast detail)Scoree value
Q6GPV5 E3 ubiquitin-protein ligase RNF1811468e-009
Q5M974 E3 ubiquitin-protein ligase RNF1811451e-008
Q6AXU4 E3 ubiquitin-protein ligase RNF1811441e-008
Q9CY62 E3 ubiquitin-protein ligase RNF1811432e-008
Q9P0P0 E3 ubiquitin-protein ligase RNF1811404e-008

TrEMBL top hits (Blast detail)Scoree value
Q9ZQF5 AT2G15580 protein4604e-044
C6T4S3 Putative uncharacterized protein2607e-021
B9T2M7 Putative uncharacterized protein2581e-020
A5ASH9 Putative uncharacterized protein2543e-020
B9IMK4 Predicted protein2526e-020

Arabidopsis top hits (Blast detail)Scoree value
AT2G15580.1 zinc finger (C3HC4-type RING finger) family protein4612e-046
AT1G55530.1 zinc finger (C3HC4-type RING finger) family protein1646e-012
AT3G19950.1 zinc finger (C3HC4-type RING finger) family protein1556e-011
AT1G49850.1 zinc finger (C3HC4-type RING finger) family protein1531e-010
AT4G26400.2 zinc finger (C3HC4-type RING finger) family protein1521e-010

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
93  50%
 
122  33%
 
191  17%

Unigene MembersMember information