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Information for unigene UN25515

FASTA Sequence
Unigene ID: UN25515Length: 859 SSR 
GGATCACATTCACATCACATTGATTTCTGGAGTTTTTTTCTTTATCTTTAATCCAAAGCTTCTTCTTCGTTTTCTTTAAAACCAAT
CTTACATTCTTTTCTCTGAGTTATAGAGAAATGGCTGTTGGTGAGGTCATGAGGATGGACGTTCCCACCGGTGGAGATCTGACTGT
TAGTTCGCCTGAACTACATGTTCTAGCTGTCGACGATAGTGTTGTGGACCGTAAAGTCATCGAGAGGTTGCTAAGAATCTCTTCTT
GCAAAGTGACGACTGTAGAGAGTGGGACTAGGGCTTTGCAGTATCTTGGCTTAGATGGAAACACAGGAGCTTCTGATCTTAAGGAT
TTGAAGGTGAATTTAATAGTGACAGATTACTCAATGCCAGGACTAACAGGATATGATCTTCTCAAGAAGATTAAGGAATCTTCTAC
ATTCAGAGAAGTACCTATAGTGATCATGTCATCTGAGAACATCTTAACTCTTATAGAACGATGTTTGAAGGAAGGAGCTGAGGAGT
TCCTGTTAAAACCGGTGAAGCCCTCAGATGTCAAGCGAATAAAACAACTTATAATGAAAAATGAAGCAGAGGACTGCAAAACCTTG
ACCCATTCTAACAAGAGAAACCTTGGAGAAGATGCTGATACATCATCATCATCATCATCATCAAGTGGTGATGATTCTTATGTCAA
GGACTTTCCATCTTCAAAACGGATGAAATTAGAATCTGATCAATTTTCTTCTTTCCTTTGAAATACATAGAGCCAAGACCTTAGCT
AGCATTGTCTGTTAATATTCCACATCTAAGTTTTTGTTCAGGCGTTTTTGTTTTGTGGTCAATACGAAGACAGTGTTTCCTGTTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002893028 hypothetical protein ARALYDRAFT_889335 [Arabidopsis lyrata subsp. lyrata]8748e-092
NP_173339 two-component response regulator ARR7 [Arabidopsis thaliana]8229e-086
NP_177627 two-component response regulator ARR15 [Arabidopsis thaliana]6401e-064
XP_002888998 hypothetical protein ARALYDRAFT_316423 [Arabidopsis lyrata subsp. lyrata]6346e-064
XP_002511471 two-component sensor protein histidine protein kinase, putative [Ricinus communis]5754e-057

Swiss-Prot top hits (Blast detail)Scoree value
Q9ZWS7 Two-component response regulator ARR78288e-088
Q7G8V2 Two-component response regulator ARR156405e-066
Q9SB04 Two-component response regulator ARR55187e-052
Q9ZWS6 Two-component response regulator ARR65009e-050
O82798 Two-component response regulator ARR44991e-049

TrEMBL top hits (Blast detail)Scoree value
Q2HIJ6 At1g190508226e-086
B9R8Z6 Two-component sensor protein histidine protein kinase, putative5753e-057
C6SY70 Putative uncharacterized protein5377e-053
C6T4K4 Putative uncharacterized protein5369e-053
B9IEK8 Type-a response regulator5332e-052

Arabidopsis top hits (Blast detail)Scoree value
AT1G19050.1 ARR7 (RESPONSE REGULATOR 7); transcription regulator/ two-component response regulator8296e-089
AT1G74890.1 ARR15 (RESPONSE REGULATOR 15); transcription regulator/ two-component response regulator6405e-067
AT3G48100.1 ARR5 (ARABIDOPSIS RESPONSE REGULATOR 5); transcription regulator/ two-component response regulator5187e-053
AT5G62920.1 ARR6 (RESPONSE REGULATOR 6); transcription regulator/ two-component response regulator5008e-051
AT1G10470.1 ARR4 (RESPONSE REGULATOR 4); protein binding / transcription regulator/ two-component response regulator4991e-050

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  67%
 
61  33%

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