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Information for unigene UN25518

FASTA Sequence
Unigene ID: UN25518Length: 1882 SSR 
CTGCAACAAAAATATAATCTAAAAGATCCAATCCTTCTTCTTCTTTTTTCTTTTCTTGTCAGAGAAAACAATCAAAAGATGGGTAA
CAGTTTAGGCGGCAAGAAAACGACCAAAGTCATGAAAATAGACGGCGAGACTTTTAAACTGAAAACTCCAGTGACCGCGGAAGAAG
TCTTGAAAGACTTTCCCGGCCACGTTTTGTTAGAGTCCGAATCCGTCAAGCACTACGGTGCTCGAGCCAAACCACTTGAGATGAAG
CAAAGGTTGGAGGCGAAGCGGCTCTACTTCGTGGTGGAACCGGTGAAGGAGTGTCCAACGAGAAGGGTAAGGTCGGGAATACACAT
GAGTGCAAAGGAGAGGCTTGAGAATCTCATGCTTGCGCGTAGATCATCTTCCGATCTTTGCATACTCAAACCGGCGGGAGAATGGT
CAAAGACGGAGGAAGGAGGAGGAGGAGGAGCGGTGAGGGTGAAGCTGAGGATTCCAAAGGCGGAGCTGGAAAGACTCGTTAAAGAG
GGAGCCACGGAGGCGGAGGCTACTCAGAAGATTGCCGCTCTCTATATGGCCAAACACAGCCATAACGAAGGGGCTCGGAACACGCT
ACAAGGTCGTGAGGGTGGAGGAGACGAGCCTACCGCCGCCATCGCTACAGCCACATCCCTCGCAACGAGGGGAGTCAAGTCACGTC
TGAAGCGAGTGAGTTTCATGGCGGAAAGAGGAGGAAGCGAGATTACCGTTGCTTGAAGATGATGAACGATTAAATACATATATGTA
ATGCATAGACTGCTCCTCAAAGTTTCTGCATCTCGTTGTACATAAAGAGCAGAGTTTTGAGAGAGAGCGAGCTAATGAGTAGTTCA
TACATGTCTCCGCTATGCAGCTAGAGTTTTTAGTATTATTTATTACAAAAGATAGAACAGTTTTTAGTATTATTTATTACAAAAGA
TAGAACGTTTTACTATTTGTAGTCAGATTCATCACTGTCTCATTTATCTGTTTCTTGGGAAGATAAGAGTAAAGATACTCTGTTTC
TCTATAGCTTCTAGGCTCGTTTTGTCCTTCTTCCGACCTCAAGAGCCAACTCTGTATCAATCTTCAGTGAGATATCCAACGCTTTA
ACCGAATGAGTCAGAGCTCCACTGCTAATGAATGTAACTCCACTTTGTCCAATCTTGTGTACTGTCTCAATTGTTACGTTGCCTGA
AGCCTCCGTCTCGACTCTTCCATTGATTAGCTCCACCGCATCTTTAAGCATGGTGACATCAACATCTCCATTCTCCAACGGTACAA
CCATATTGTCCAGCATTATTCTCGTCACCCTACTCTTGGACCCACTTACATACTCTAACACTTCCTTCACTTCCTCCAGCGTCCGT
GTCTCCAGTATACGTGCAGGGTACGCTGCATCCGCCATTAACTTGGTGAGGGTAGCGATACCGCTCATCCTCTGCATAAAGTTGAG
CACAACTCTTTCAGCGACACAATCTTATGAGCGTTTCCTGATACTTTCCCAAACTTTAACCCTTTATGAACATAATCTCCATCCTT
ACGCATCCATTCAACCTTCAAAGAGGGATCAACTTGCTCAAAAATCATCTCAGCAAGAGCGATCCCAGCAACAATCCCCTCTTCTT
TCGCCAAGAAATAAGCTTCCACTTCCATATCAAACGGTATCGTAGCCATACACGTCACATCTCCTGTGTCACCAGCATCTTCGGCT
AGGGCTAGCTCGATGACTGCTTTCAAATCGTAAGTAGGATGCGAAGGAGGCTTTATCGCCATGGAACCGTGTGAAACTCCTCCTCC
GGCCGTTTGAGTCGCAGAAGCAGACATTTTCACGAGGCTCCTTTGAATAGCGTAGAATTGAGGCGACAGCAACCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_178243 uncharacterized protein [Arabidopsis thaliana]8359e-087
XP_002875068 hypothetical protein ARALYDRAFT_322480 [Arabidopsis lyrata subsp. lyrata]7131e-072
XP_002876744 hypothetical protein ARALYDRAFT_484052 [Arabidopsis lyrata subsp. lyrata]5912e-058
NP_565259 quinolinate phoshoribosyltransferase [Arabidopsis thaliana]5867e-058
NP_973393 quinolinate phoshoribosyltransferase [Arabidopsis thaliana]5212e-050

Swiss-Prot top hits (Blast detail)Scoree value
Q6NLC8 Uncharacterized protein At1g664802413e-019
P77938 Probable nicotinate-nucleotide pyrophosphorylase [carboxylating]1526e-009
P30012 Nicotinate-nucleotide pyrophosphorylase [carboxylating]1472e-008
P30011 Nicotinate-nucleotide pyrophosphorylase [carboxylating]1312e-006

TrEMBL top hits (Blast detail)Scoree value
Q52K81 At2g013408356e-087
Q9ZU32 At2g01350/F10A8.235865e-058
A8MRX1 Uncharacterized protein At2g01350.35212e-050
A8MS71 Uncharacterized protein At2g01350.45212e-050
Q8LC11 NADC homolog5212e-050

Arabidopsis top hits (Blast detail)Scoree value
AT2G01340.1 unknown protein8506e-091
AT2G01350.1 QPT (QUINOLINATE PHOSHORIBOSYLTRANSFERASE); nicotinate-nucleotide diphosphorylase (carboxylating)5862e-060
AT2G01350.3 QPT (QUINOLINATE PHOSHORIBOSYLTRANSFERASE); nicotinate-nucleotide diphosphorylase (carboxylating)5343e-054
AT2G01350.2 QPT (QUINOLINATE PHOSHORIBOSYLTRANSFERASE); nicotinate-nucleotide diphosphorylase (carboxylating)5226e-053
AT2G01350.4 QPT (QUINOLINATE PHOSHORIBOSYLTRANSFERASE); nicotinate-nucleotide diphosphorylase (carboxylating)5226e-053

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  50%
 
112  50%

Unigene MembersMember information