Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN25524

FASTA Sequence
Unigene ID: UN25524Length: 733 SSR 
TTTTTTTTAGTAATGCTCATTATATATCTCGTAGGTCCATACACTAATCTGTATACAGAAACAGACTCTTGTCTTATTGAATAGAA
TATGAAGAAGAATCAACAAAAGATCTGAAAAAAAAATCAAATCTTTTTTTCAAGTATCAGAAAAGCTTAAAGCTTGGAGACGAGAG
ATTGGTAAAAAATAGCACGAGATAGGTAAGTGACTTTCATGGTATCCTTCATCTTGAACTCAACATTCACCACCGTCAGGTTCCTC
CCACTCCTCACCACTGATCCTTCCACCACCAATTCACTCGAAACTGGAGCAGCAGAGAGATAAGACATACTCAATTCACCGAGGAA
CAGCTGTTTCTCTTCAGACACGATGGTTCTCGCGCAAGCCATTGATAATCTCTCTGCAATTGACGCCACTGCTCCTCCGTGTAACC
CATTAAAGTAATTGGTAAGGGCAGGCGTGACGACGACGGAGCACGTGATACGGCCACGTGAGACGGAGAGAGCTCTGATGTTGTTC
TGGAACAAGACGGAGAACGAGTCGAAGGAGGCGAAATCGTCGAGGGAGGAGTCTGGGTGGGTGAAGGAGTGGAGGAAGTTTTCGAA
TAGGGATACGTTTTTGGGATCGATTTCTTTGGATATCTTCGTCGTCTCGGACGAGATCGGAGAAGGAGAAGAAGACATTGTTGTTT
GTTTGTTTGGTTTCTTCTGTGGTTGGCTCTCTCTCTCTAACTCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002878370 thioesterase family protein [Arabidopsis lyrata subsp. lyrata]6471e-065
NP_191679 thioredoxin family protein [Arabidopsis thaliana]6076e-061
XP_002511812 acyl-CoA thioesterase, putative [Ricinus communis]4194e-039
XP_002511810 acyl-CoA thioesterase, putative [Ricinus communis]4014e-037
XP_002511811 acyl-CoA thioesterase, putative [Ricinus communis]4006e-037

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9M2E4 AT3g61200/T20K12_1006074e-061
B9RDM3 Acyl-CoA thioesterase, putative4193e-039
B9RDM1 Acyl-CoA thioesterase, putative4013e-037
B9RDM2 Acyl-CoA thioesterase, putative4004e-037
B9GPW9 Predicted protein3923e-036

Arabidopsis top hits (Blast detail)Scoree value
AT3G61200.1 thioesterase family protein6082e-063
AT1G04290.1 thioesterase family protein1521e-010

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  67%
 
61  33%

Unigene MembersMember information