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Information for unigene UN25529

FASTA Sequence
Unigene ID: UN25529Length: 920  SNP
GAGAAATTAAAGACTCTTTTCATCAAAAGCATTACTACATACGCATCTATATTGTGTATATGTGTCCGTGTTGTACATAAAATTTC
ATCTATCTTTACATCAAACTCCAAATCTAAAAACAAGGATCAAACAAAACTAAAAGATAACCCCTTGAAGATGGATCTATCTCCTC
GAACAAAACCCTGACATGTTCTGTTTTTGGTGTAGTCAACTACTCAAACTCCGATCAGAATCAAATCAAATCAAAAAGGGTTTCAT
CCATCAAAAGCTTTCATCGAAATATCTTCTTCTTTATCATCATCATAATAAGGCCGAGTCCAAAGCAAGAGCATCAGATCCTTTCA
TGATCCGGAGTCTCTTACAAGAGGAAGAGAACATATCCCATGGAACATCACCAACCAACATCCAGTCTCCATCTTTATCCTCGTAC
GTTGGTACAACTCCAGATCCTTTGTATCCTTCTCTTTCGCAGTATTCACCTATCGTGAATTTGAACATGTTCTCCAAAGCCTTTAG
AAGCTCAGCATAGTTTTTGTATGTTTTGAGATCTATTTTCCTAAGATAAGGAGCTCCATCCATACTCACTTTCACATAGCTAACAC
TGTTGTTGTTCTTACGGTAAGATCTCACCGGAGGCCAACCAACGATTTGAGTTTTCGTAGGAGGTGTAGATGCTTCCTCGTTATCG
CTTTGTAGTTGACGTTTGATGCTTCTAACGCAAGAAACCTCTTGTTCTTCCTTATCTTGCTCCGTTCCGGGTAATCCAAGACGAAG
CTCTGTGTCCTTAAGGTTAAGCTCATTGACTTTCTCGTAAGCCATTTTTTCAAGATCAAGAAACCTCTCTCTATATGTCCTTGTGT
GATTTCCAAAGCAGAATCCTTGTTCTTCTTCTTGTTCTTGTTGGTGCGTTTGGTTCCCCA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002885542 indoleacetic acid-induced protein 2 [Arabidopsis lyrata subsp. lyrata]7672e-079
NP_188943 auxin-responsive protein IAA2 [Arabidopsis thaliana]7645e-079
ADL70491 indole-3-acetic acid inducible 2 [Arabidopsis thaliana]7602e-078
AAB97164 auxin-responsive protein IAA2 [Arabidopsis thaliana]7583e-078
ADC29363 indole-3-acetic acid inducible 2 [Arabidopsis thaliana]7583e-078

Swiss-Prot top hits (Blast detail)Scoree value
P49678 Auxin-responsive protein IAA27642e-080
P49677 Auxin-responsive protein IAA16585e-068
P32294 Auxin-induced protein 22B4802e-047
P49679 Auxin-induced protein IAA44775e-047
P33077 Auxin-responsive protein IAA44094e-039

TrEMBL top hits (Blast detail)Scoree value
D3K0A7 Indole-3-acetic acid inducible 27644e-079
D3K0B1 Indole-3-acetic acid inducible 27582e-078
D3K0A4 Indole-3-acetic acid inducible 16613e-067
Q67YC2 Auxin-responsive protein IAA16587e-067
D3K0A2 Indole-3-acetic acid inducible 16571e-066

Arabidopsis top hits (Blast detail)Scoree value
AT3G23030.1 IAA2 (INDOLE-3-ACETIC ACID INDUCIBLE 2); transcription factor7642e-081
AT4G14560.1 IAA1 (INDOLE-3-ACETIC ACID INDUCIBLE); protein binding / transcription factor6584e-069
AT5G43700.1 ATAUX2-11 (AUXIN INDUCIBLE 2-11); DNA binding / transcription factor4093e-040
AT1G04240.1 SHY2 (SHORT HYPOCOTYL 2); transcription factor3995e-039
AT1G15580.1 IAA5 (INDOLE-3-ACETIC ACID INDUCIBLE 5); transcription factor3512e-033

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
85  45%
 
105  45%
 
111  9%

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