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Information for unigene UN25530
| FASTA Sequence |
| Unigene ID: UN25530 | Length: 1726 |
SSR | | GGAGAGTCACAGTGTCGCAGATAATGTTGTCTTGGAAAGAGAGTCTAGAGAGAGAGTGTGTTTGTGTCTCAGTTCTTTTCCCATTT
CTTTTACACAAACAAAGTTTGATATATATTTTTTTGTTCATGTAGCTTCTTATTAAAATAGATTTTTTTTTCATATTTGAGGAAAA
GAGAGAGAATTTAAGATAAGAGGAGCAGATAAGAATCTATTCACCTTCTTTGTGAAGCTTTTGAGTTGAATTCCATTTTTTCTTTT
CCTTGGAGGTTTCTCATTGGTTTTCTCGAGAATATTATCATATCTGTGGTTTAGGAGAAGAAGATAAGAGTGAGAGCTTCACTTCA
CTTCACTGTAGCTTCCAAAAAAGTCTTTTAACTTTTCTCCTTGCTTCTCTTTAACCTTTGAACAGCTTCAACTTTCTCAGATTTGT
TTGTCGAATCTCTAATGGAGCAAAGAAGAAGAAGAAGAAGAAACAGATACAGCGACACTCTCTCTCTGCTCTTACTCTTCTTCTTA
GCCTTCACTTCAAGAACAACCACAAGCTCAAGTTGTCGGCGAAGAACTGTGAAACACTTATCCACAACTCCTCCTCCTCCCTCATC
CACGCCACTCGCATCCAGAATCACTTCCAAGGTTATCGTAGTCAGCATCGTTTCAGGGGTTTTAACAGGGTTGCTCTCCGCCTTAG
CGTTAGCTTTCTTGGTCCGTTGCATTGTCAAGTACATGAGACAGACGCCAATCCTCAAAGGCCCTGTGGTGTTCTCCCCTAAGATT
ACACCCAAGTCTCTCCACGCAGCTCTTGGTAATGGTATCCAGCTGCTTGGCTCAGACCCTAATGGTAGATACCACAAGATGGTGCT
GGATAACGGTCTGGTGGTTGCAGTGAAGAGACTAGGCTCGCTCGAAGGAAACGGCTCGCCAGAAGCAACAACAAGCAAGTCGGTTA
AGAGAAGGTTGCAGAAGGAACTTGAGCTTCTCGCTGGTTTAAGGCATAGGAACCTTATGAGTCTAAGAGCTTATGTTCGGGAATCC
GATGAGTTCTCTCTCGTCTATGATTACATGCCGAATGGTAGTCTTGAGGATGTGATGAGTAAGGTTAGAGGGAATGAGATAGAGCT
AGGATGGGAGGTTAGGCTGAGAATTGCTGTTGGAATCGTGAAAGGGCTTCAGTATCTTCATTTCAGCTGTGAGCATCAGATCCTTC
ATTATAACTTGAAACCTACTAATGTCATGTTGGATTCTGAGTTTGAGCCTAGGCTTACTGATTGCGGATTGGCCAAGATCATGCCT
GCTTCACACACATCATCAGTAGTATCTTGCTACTCTGCTCCTGAGTCATCTCAAAGTAACAGATATACATAGAAAAGCGATGTATT
TAGCTTTGGGATGATATTGGGTGTTCTTTTGACTGGAAAAGACCCAACCCAGCCTTTCTGTGTAGAAGGTGCAAGTGGAGGCAGCT
TAGGACTGTGGCTGAAGCATTTGCAGCAATCAGGGGAAGCACGATAAGCGTTGGATAAGAGTATACTTGGGGAGGAAGTGGAGGAA
GACGAGATGTTAATGGCTTTACGAATCACCATTGTCTGCCTTTCTGACTTTCCTGCGGACCGGCCTTCAAGTGATGAGCTTGTCCA
CATGCTTACACAACTGCACAGCTTTTAGCCTAATAATGTTCTTGTAGCAAAACCTATCCAAAACATCTGTAGTCACATCTCAATGT
ATTTTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002873606 predicted protein [Arabidopsis lyrata subsp. lyrata] | 1764 | 2e-194 |
| NP_850812 receptor-like kinase CORYNE [Arabidopsis thaliana] | 1748 | 1e-192 |
| XP_002512662 ATP binding protein, putative [Ricinus communis] | 1291 | 1e-139 |
| XP_002267466 PREDICTED: hypothetical protein [Vitis vinifera] | 1285 | 5e-139 |
| NP_196833 receptor-like kinase CORYNE [Arabidopsis thaliana] | 1197 | 8e-129 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LYN8 Leucine-rich repeat receptor protein kinase EXS | 390 | 1e-036 |
| Q8L899 Systemin receptor SR160 | 373 | 1e-034 |
| P47735 Receptor-like protein kinase 5 | 372 | 2e-034 |
| Q8GUQ5 Brassinosteroid LRR receptor kinase | 370 | 3e-034 |
| Q9FZ59 Leucine-rich repeat receptor-like protein kinase PEPR2 | 355 | 2e-032 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9LYU7 Protein kinase-like | 1748 | 7e-193 |
| B9RFZ3 ATP binding protein, putative | 1291 | 7e-140 |
| Q3E9I0 Putative uncharacterized protein At5g13290.1 | 1197 | 6e-129 |
| B9GMT0 Predicted protein | 1130 | 3e-121 |
| B9EW01 Putative uncharacterized protein | 1006 | 8e-107 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G13290.2 CRN (CORYNE); ATP binding / kinase/ protein kinase | 1749 | 3e-195 |
| AT5G13290.1 CRN (CORYNE); ATP binding / kinase/ protein kinase | 1198 | 2e-131 |
| AT5G13290.3 CRN (CORYNE); ATP binding / kinase/ protein kinase | 722 | 4e-076 |
| AT2G31880.1 leucine-rich repeat transmembrane protein kinase, putative | 490 | 3e-049 |
| AT5G07280.1 EMS1 (EXCESS MICROSPOROCYTES1); kinase/ transmembrane receptor protein kinase | 390 | 1e-037 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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