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Information for unigene UN25532
| FASTA Sequence |
| Unigene ID: UN25532 | Length: 1482 |
SSR | | TTTTTCATAAGTTTCCAACGAATCAAAACAGGGGTAAGGTTAGTTCCAAAACGTCTTAAACAATTGTTCCAAGTAAAACGAGTTAG
CCTAGATTGAGATATTTAAGAACATCGATCTTGTTGAGATGGAACAATTTGCAAATCTCTACTATGGTCTCCTCATCGAGCCCTTC
CTCACTAGCGTCACGAAGTAGCTTGTATAACTCTTCTGATGGCAGCAAAACACATGTGGGAGACTGAGCGTCTGGTTCTGGTTTGT
TCTCTAACTCGAAATTCTTCTCCAAGGCTTTTACTTGGTTAACGCTTAACCGTCTCTTCTTCTCGGCTAAACCGGTTTGTCCTCTT
TCCTCGGTTATGGCTTCTTCTTCCTCCTCCTCGTAGCCTTCAAGCATCGACTGAAATTCTCTCCCGTATCTTCTTGGACTCTGCTG
ATCTGTTTGCCAAAATTGAGGATTTTGAGGTTAATACTATGAAATTTTAAGGGCTTGTTTGAAAATTAAAACATTGGTATAAGATT
AAGAACCTGTAGAAGTAGTGGGACATAAAGAGATGAGACCACCCACTGAATCTGAACTACTTAATCTCTTCATCATCAAACAACAC
TACAAAAGGGTCTTTTCAAAAACCTTTTAGTTACTTCAAAACAATGATTTTTTTTTGTTTGTTTAACTCTCAGTTTAATGCATCTA
GTACTTGATGATGATCTTGTCTCTCTTATAACCCATCAAGAAAGATAGCAAAACTTTGAAGGAAGAGAGAAATTAAAACAATGGGG
GAGATTCTATTCACAGACAGAGGAGGAGAGAGAGAGACTGACTCGAGTTTTTTTTTTTTTTTTTTATATATTCGTCATCAAAGACC
AATCAAATCAATCTCAACGTACCAACAAAAGTTTTCATAGTCAACATCCAATGATCTTAACTTCCAGAAGAAGAAAAATAAAATGA
CATACGGTCTAATTAAATGCTCCGAAACCAAGAAAGGTCTAAAGGAAAAGAAAGCCGGTTTGCGTTAAACCGGGGGAGTTTAGGCC
GCAGGTTTCTTCTGAACAAGATCCTCAATCAAATCAGCCGCCTCTTGAATCGTCGTAATGTTCTGAGCATCAGCTTCCTCCACACT
TATGTTAAACTTTTCCTCCAATGCCATCACTATCTCCACTGTGTCAAGAGAATCGGCGCCAAGAGCAGAGAACTTGGACTCAGCAG
TGAGCGCAGTGTCAGCAGACAAAGCCAACTGTTCCTTTACAATGTCACTCACTTTCTGCACTGTCTCTGGTTTTGCAGCGCAACTG
ATTTGAAGACGAAGGCTCTTTGAAGACTGGAAACGACCAAATGAGATAGACTGAAAACTCGAGGGTTTCCTCAACACCTGGGAGAT
TCTGGTCGATTGTATGGAGGGAGCTTTGAAGCTTAGAGAAGTTGCTGACAAAGAAGCCATTGGAGGAGATGAAGCTCAGTATACAG
GTCAGGGGCAGAAAAAAATG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002869691 hypothetical protein ARALYDRAFT_914076 [Arabidopsis lyrata subsp. lyrata] | 543 | 5e-053 |
| NP_194235 acyl carrier protein 4 [Arabidopsis thaliana] | 532 | 9e-052 |
| XP_002267614 PREDICTED: hypothetical protein [Vitis vinifera] | 369 | 7e-033 |
| XP_002318163 predicted protein [Populus trichocarpa] | 353 | 5e-031 |
| XP_002511107 acyl carrier protein, putative [Ricinus communis] | 347 | 3e-030 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P93092 Acyl carrier protein 1, chloroplastic | 323 | 6e-029 |
| P23235 Acyl carrier protein 2, chloroplastic | 315 | 5e-028 |
| P52411 Acyl carrier protein 1, chloroplastic | 305 | 8e-027 |
| P11829 Acyl carrier protein 1, chloroplastic | 304 | 1e-026 |
| P10352 Acyl carrier protein, chloroplastic | 303 | 1e-026 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9SW21 Acyl carrier protein | 532 | 6e-052 |
| B9I3Y4 Acyl carrier protein | 353 | 3e-031 |
| B9RA82 Acyl carrier protein | 347 | 2e-030 |
| Q944N0 Acyl carrier protein | 345 | 3e-030 |
| B7FHC3 Acyl carrier protein | 341 | 9e-030 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G25050.1 ACP4 (acyl carrier protein 4); acyl carrier | 541 | 3e-055 |
| AT3G05020.1 ACP1 (acyl carrier protein 1); acyl carrier | 304 | 9e-028 |
| AT5G27200.1 ACP5 (acyl carrier protein 5); acyl carrier | 280 | 5e-025 |
| AT2G22430.1 ATHB6; DNA binding / protein binding / sequence-specific DNA binding / transcription activator/ transcription factor | 267 | 2e-023 |
| AT1G54580.1 ACP2 (ACYL CARRIER PROTEIN 2); acyl carrier | 263 | 5e-023 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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