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Information for unigene UN25540
FASTA Sequence |
Unigene ID: UN25540 | Length: 604 |
| SNP | GTAAGAAGAGAGATACATTTGCTTCTACCACAGGTCCAAGGGCTTGTGGTCAAGAAAATAACATTTCAACTGAAAACGAAAACACA
TTCCAAGAACAACAGTTCAACTCAATTACAACTCAAAGTTTGCAGAAATACAAATAAACAACCATTCTTTCTCTACTCTACCACCT
GCGGAGGCGGCGGCGACTGCTGAGACTCCATCGGAATCCCAAGATCATTCCTCTTGAGAACAGGAAGGGCGACGAAAGACTTGGTC
TTGCTGATGGGCCTGCTCTTCTCAAGCCTCACAACGTCACCCACCTTGAACACGTTATCAGGGTCATGCGCCTGATACTTCTTCTT
CATCCTCACGCGCCTTTTGTACTTGGGGTGCGGAGCCAGCCTCACCACCTCCACCGCCACCGTCTTGTCGTTCGTTGCGCACACCA
CGCGTCCTTGCATCGTCTTCATGGCTCTTATCGCCGGGACTAGGCCAGGCTTCCTGGTGTTCGGGAAGGAAACGGGTTTGGAGAGA
GAAGAGAGTGGAGTGGAGCCATGGGTGAATGGGGAGGAGGAGATCTTCAGAGACTGCAGAGATGAGGCTAGCGACGCCATTGATTT
CC
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GenBank top hits (Blast detail) | Score | e value |
NP_178103 30S ribosomal protein S17 [Arabidopsis thaliana] | 540 | 2e-053 |
AAA84030 ribosomal protein S17 [Arabidopsis thaliana] | 540 | 2e-053 |
3BBN Chain Q, Homology Model For The Spinach Chloroplast 30s Subunit Fitted To 9.4a Cryo-Em Map Of The 70s Chlororibosome | 540 | 2e-053 |
XP_002887857 hypothetical protein ARALYDRAFT_477281 [Arabidopsis lyrata subsp. lyrata] | 531 | 2e-052 |
XP_002284468 PREDICTED: hypothetical protein [Vitis vinifera] | 433 | 6e-041 |
Swiss-Prot top hits (Blast detail) | Score | e value |
P16180 30S ribosomal protein S17, chloroplastic | 540 | 1e-054 |
P17092 30S ribosomal protein S17, chloroplastic (Fragment) | 338 | 3e-031 |
Q9TJN6 30S ribosomal protein S17, chloroplastic | 306 | 2e-027 |
Q9ZST1 30S ribosomal protein S17, chloroplastic | 296 | 2e-026 |
A9BH96 30S ribosomal protein S17 | 198 | 5e-015 |
TrEMBL top hits (Blast detail) | Score | e value |
B9GG36 Predicted protein | 420 | 1e-039 |
B9RQK5 30S ribosomal protein S17, putative | 418 | 2e-039 |
B7FMT1 Putative uncharacterized protein | 389 | 5e-036 |
A9NRW2 Putative uncharacterized protein | 329 | 4e-029 |
B4G1S9 Putative uncharacterized protein | 306 | 2e-026 |
Arabidopsis top hits (Blast detail) | Score | e value |
AT1G79850.1 RPS17 (RIBOSOMAL PROTEIN S17); structural constituent of ribosome | 540 | 1e-055 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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