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Information for unigene UN25540

FASTA Sequence
Unigene ID: UN25540Length: 604  SNP
GTAAGAAGAGAGATACATTTGCTTCTACCACAGGTCCAAGGGCTTGTGGTCAAGAAAATAACATTTCAACTGAAAACGAAAACACA
TTCCAAGAACAACAGTTCAACTCAATTACAACTCAAAGTTTGCAGAAATACAAATAAACAACCATTCTTTCTCTACTCTACCACCT
GCGGAGGCGGCGGCGACTGCTGAGACTCCATCGGAATCCCAAGATCATTCCTCTTGAGAACAGGAAGGGCGACGAAAGACTTGGTC
TTGCTGATGGGCCTGCTCTTCTCAAGCCTCACAACGTCACCCACCTTGAACACGTTATCAGGGTCATGCGCCTGATACTTCTTCTT
CATCCTCACGCGCCTTTTGTACTTGGGGTGCGGAGCCAGCCTCACCACCTCCACCGCCACCGTCTTGTCGTTCGTTGCGCACACCA
CGCGTCCTTGCATCGTCTTCATGGCTCTTATCGCCGGGACTAGGCCAGGCTTCCTGGTGTTCGGGAAGGAAACGGGTTTGGAGAGA
GAAGAGAGTGGAGTGGAGCCATGGGTGAATGGGGAGGAGGAGATCTTCAGAGACTGCAGAGATGAGGCTAGCGACGCCATTGATTT
CC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_178103 30S ribosomal protein S17 [Arabidopsis thaliana]5402e-053
AAA84030 ribosomal protein S17 [Arabidopsis thaliana]5402e-053
3BBN Chain Q, Homology Model For The Spinach Chloroplast 30s Subunit Fitted To 9.4a Cryo-Em Map Of The 70s Chlororibosome5402e-053
XP_002887857 hypothetical protein ARALYDRAFT_477281 [Arabidopsis lyrata subsp. lyrata]5312e-052
XP_002284468 PREDICTED: hypothetical protein [Vitis vinifera]4336e-041

Swiss-Prot top hits (Blast detail)Scoree value
P16180 30S ribosomal protein S17, chloroplastic5401e-054
P17092 30S ribosomal protein S17, chloroplastic (Fragment)3383e-031
Q9TJN6 30S ribosomal protein S17, chloroplastic3062e-027
Q9ZST1 30S ribosomal protein S17, chloroplastic2962e-026
A9BH96 30S ribosomal protein S171985e-015

TrEMBL top hits (Blast detail)Scoree value
B9GG36 Predicted protein4201e-039
B9RQK5 30S ribosomal protein S17, putative4182e-039
B7FMT1 Putative uncharacterized protein3895e-036
A9NRW2 Putative uncharacterized protein3294e-029
B4G1S9 Putative uncharacterized protein3062e-026

Arabidopsis top hits (Blast detail)Scoree value
AT1G79850.1 RPS17 (RIBOSOMAL PROTEIN S17); structural constituent of ribosome5401e-055

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
63  43%
 
102  29%
 
82  29%

Unigene MembersMember information