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Information for unigene UN25559
| FASTA Sequence |
| Unigene ID: UN25559 | Length: 814 |
SSR | | TTTTTGATCCAAAAGATTAAATTAAACCAAATAATTATACATTCGTCTTTCAGGAACCCATCCCCTATAGTTTTCTTACAGTAGTA
CATATATGCTGTTTTGCCCATTCCCAGAAGAAGAAGATCACAAGCAACCAACAAGTAGAACCCATACAAAAAAAAAGTTGTCAAGT
ATTCAGTGATGAGAACTGATATACTCACCCTCCTCTCTCTCTCTTTCGAATATCTTCTTGATTGCCTCAAGAAAACCGTTTCAAAC
CCGAATCTGTATCCGTTACCATTAAAAGTATAAGCTGACATAACAGAGAAGAGACCACAGTACCTACCCTTAGGACTCAGAGCTGC
TTGCAAGATTCACCGAGGACACAAATCTTGGGACCAGCTCTGCCTCGTTGGTCTTCGAAGCCGCCAAATCTTCTAACCTCTTCCAT
GTTTTTTCCCGGTTTGCTTTAACCTCTGTCTTATTCTCTTCTTCCACTTGGTATTTGGCTAAACACTCATCGAAGAGAGCTTGGTC
AATGTCGGAGAACACTTTCCTCACGTTTAGAGTCAGAGTCTTAACCGCTTGGTTCCAGTGTCCACGAGTGTTCCTCTCAAGAGCTG
GGAAGACTATAGGCAAGATCACTTTGTAGTTGTGAGTGATCAGGTTTCTTATGTGATCGTTGTTCCATAGAAACAATGCTCTCTCA
GCAACCTGGAAATGCGAACTGTTGAGACAACGAGCGATCTGTCGGAACAAAGGCCCCATACAGCGTTGAAACTCAGCAGCTTGAGT
AGCTTCCAAGACTTCTTTCAACTCACCAAGAAACATCACT
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| GenBank top hits (Blast detail) | Score | e value |
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| XP_002885457 protein phosphatase 2A B [Arabidopsis lyrata subsp. lyrata] | 729 | 5e-075 |
| BAB02360 protein phosphatase 2A B' regulatory subunit [Arabidopsis thaliana] | 698 | 2e-071 |
| NP_188802 protein phosphatase 2 (formerly 2A), regulatory subunit B' [Arabidopsis thaliana] | 698 | 2e-071 |
| CAB10320 phosphatase like protein [Arabidopsis thaliana] | 659 | 7e-067 |
| NP_567464 protein phosphatase 2 (formerly 2A), regulatory subunit B' [Arabidopsis thaliana] | 659 | 7e-067 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LVE2 Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' zeta isoform | 698 | 9e-073 |
| Q8RW96 Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' gamma isoform | 659 | 3e-068 |
| Q8LF36 Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform | 531 | 2e-053 |
| Q9LU89 Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' eta isoform | 527 | 6e-053 |
| Q9ZQY6 Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B' delta isoform | 464 | 1e-045 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q0WNY8 Phosphatase like protein | 659 | 5e-067 |
| B9SH46 Protein phosphatase 2a, regulatory subunit, putative | 640 | 7e-065 |
| B9IAI9 Predicted protein (Fragment) | 624 | 5e-063 |
| A5AQF8 Putative uncharacterized protein | 620 | 2e-062 |
| A9PGQ5 Putative uncharacterized protein | 607 | 5e-061 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G21650.1 serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B', putative | 698 | 8e-074 |
| AT4G15415.2 ATB' GAMMA; poly(U) binding / protein phosphatase type 2A regulator | 659 | 3e-069 |
| AT4G15415.1 ATB' GAMMA; poly(U) binding / protein phosphatase type 2A regulator | 659 | 3e-069 |
| AT1G13460.1 serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B', putative | 531 | 2e-054 |
| AT1G13460.2 serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B', putative | 531 | 2e-054 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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