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Information for unigene UN25569
| FASTA Sequence |
| Unigene ID: UN25569 | Length: 828 |
SSR | | GGTAGAACTCTAAGGCTTGTATAGTTGTTCCAACTTTATGATAACATAGTATAAAAAAGCGTAGTAATAATGAATTTACAGTAGGC
CTTTGTGAATATGATTGTGATAGTAACATCCTAAAAGGAAGAGTGGGAAACATTATATAATGAGAAGGAGAAAGAAAATCAATGGG
GAGAAGCAGGACGAACTTTGGTTTTGAAGAGGAGAATGTAGAGTTTGTCCATTGAGAAATAAATAAAACAACCTGTGGAATGTGTC
ACGAACGACCCGAAACTTGACCCCACTATGCAATGCCATGCTGGTCCATACACTTTGTCAAATTCCTTCTTGAGATTGAAAGCCAT
GTGCTTCGAACTAAACTTCTCCAAACTATCCAACGTCGTTCTCGCACACCTAAACGCATGTGCTTGCATAAACCCCGGCATGTCCG
CCGCTAATATCCTCACCGTTAACATCTCCGCCGCTGCAGCTATCCTCGCCTCCGTATCCCTCTCCACGTGAGACACCGACTTCCTC
CCTTCCTCCGCAGCACAACCACCACCACCACCACCGCCTTTCTTTCTCTCATTACTAGTAGTCTTTAACTCGAAGATGTCCCTCCT
TAGATGGTTTTGTATTTTGCTTGACTGGACCACGATTGATTTTGATACCTCTTCTTGTAATACTGATGGTGGTGGGATCTGGACTT
TGTTTGGTGTGGATTTAGGGTTTATGAGTGACTGCTTCGAAGTGGTGGTGGAGAACTTGTAGAAGCTCATGAGACTTTTCTTCTTT
TTTGGTTTCTCTTGGTTTGCCATATTCATTTTTAAAAATCTTTTTGTGTAAAAA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002873982 hypothetical protein ARALYDRAFT_488913 [Arabidopsis lyrata subsp. lyrata] | 838 | 1e-087 |
| NP_197511 dynein light chain type 1-like protein [Arabidopsis thaliana] | 837 | 2e-087 |
| CAN63502 hypothetical protein VITISV_011677 [Vitis vinifera] | 474 | 2e-045 |
| XP_002524465 axonemal dynein light chain, putative [Ricinus communis] | 464 | 3e-044 |
| XP_002281900 PREDICTED: hypothetical protein [Vitis vinifera] | 453 | 5e-043 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
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| Q86A88 Dynein light chain, cytoplasmic | 216 | 7e-017 |
| O02414 Dynein light chain LC6, flagellar outer arm | 208 | 6e-016 |
| P61285 Dynein light chain 1, cytoplasmic | 200 | 5e-015 |
| Q22799 Dynein light chain 1, cytoplasmic | 200 | 5e-015 |
| P63167 Dynein light chain 1, cytoplasmic | 200 | 5e-015 |
| TrEMBL top hits (Blast detail) | Score | e value |
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| Q6NM36 At5g20110 | 837 | 1e-087 |
| A5BHH6 Putative uncharacterized protein | 474 | 1e-045 |
| B9SEP6 Axonemal dynein light chain, putative | 464 | 2e-044 |
| B4FJN1 Putative uncharacterized protein | 375 | 4e-034 |
| B6UG18 Putative uncharacterized protein | 375 | 4e-034 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT5G20110.1 dynein light chain, putative | 838 | 5e-090 |
| AT1G23220.1 dynein light chain type 1 family protein | 269 | 5e-024 |
| AT1G52240.2 ROPGEF11 (RHO GUANYL-NUCLEOTIDE EXCHANGE FACTOR 11); Rho guanyl-nucleotide exchange factor | 205 | 1e-016 |
| AT4G15930.1 microtubule motor | 202 | 3e-016 |
| AT4G27360.1 dynein light chain, putative | 201 | 4e-016 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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