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Information for unigene UN25572

FASTA Sequence
Unigene ID: UN25572Length: 1141 SSR 
GACAGCCTGTCTATAAAGACATTTGCATACTTAATTATTCAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATAAGCTTTCGAAG
AAGATGAAGAATGATAATACCAACTCAGCAAGAAGCAATCTGGTGAAAGATAATGAACTGTTTCATGTGATTCACAAAGTCCCTTG
TGGAGATACTCCCTATGTCAAAGCCAAACATGCTCAGTTGATAGAGAAGAACCCGGAGATGGCAATAGTTTGGTTTTGGAAAGCCA
TAAACACAGGAGACAGAGTAGACAGTGCTCTCAAGGACATGGCTGTCGTAATGAAACAACTTGACCGTTCCGAAGAAGCTATCGAA
GCCATTAAATCCTTTCGTCCTCGTTGTTCCAAGAACTCTCAAGATTCCCTAGACAATGTCCTAATCGACCTATACAAGAAGTGCGG
GAGAATGGAGGAGCAAGTTGAGCTGTTGAAGAGGAAGCTAAGGCAGATCTATCAAGGAGAGGCTTTCAACGGCAAACCCACCAAGA
CCGCTAGATCCCATGGCAAGAAGTTTCAAGTGACCGTTCAACAAGAAATCGCAAGATTACTGGGGAACTTGGGATGGGCATATATG
CAACAAGCCAAGTACTTATCCGCAGAAGCGGTATACAGAAAAGCTCAGATGGTTGAGCCAGACGCTAACAAATCGTGCAACCTAGC
GATGTGCCTTATCAAACAAGGCAGGTTTGAAGAGGCAAGACCACTTCTTGACGATGTATTTACGTCTAGGGTTTTAGGTGCAGATG
ATTGTAGGACAAGGCAACGGGCTGATGAGCTTCTGAGTGAGCTAGAGGCTTCGCTGCCACGTCGGCTAGATGCTGAGATGGAGGAT
GTCTTGGGAAATATCTTGGACGATGACTTTGTTCTTGGGCTTGAAGAGATGACAGCCAGTAATTATAGATCTAAGAGGCTCCCAAT
CTTTGAACAGATCTCTTCTTTTAGAAATCAATTAGTTTGCTAGTGATTTGAATCTTATGTTTCGTGTTTGTCATATTTAGTTCGTG
TGTTCATAGTTTTGATGGGTTATAAAAGACGAATGTGTTATGTTTTCTTATGTAAATTTGTATATACAACAACAATAATAATACTG
TCATGTTGGTGACTTTTAAGACC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAB09438 unnamed protein product [Arabidopsis thaliana]14369e-157
XP_002865684 male sterility MS5 family protein [Arabidopsis lyrata subsp. lyrata]14332e-156
NP_199696 tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana]14242e-155
XP_002301774 predicted protein [Populus trichocarpa]10362e-110
XP_002521114 conserved hypothetical protein [Ricinus communis]10192e-108

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9FKB2 Gb|AAC72543.114366e-157
Q8GXU5 At5g4885014242e-155
B9GNI9 Predicted protein10362e-110
B9S545 Putative uncharacterized protein10191e-108
A5BLL8 Putative uncharacterized protein9886e-105

Arabidopsis top hits (Blast detail)Scoree value
AT5G48850.1 ATSDI1 (SULPHUR DEFICIENCY-INDUCED 1); binding14257e-158
AT1G04770.1 male sterility MS5 family protein8469e-091
AT3G51280.1 male sterility MS5, putative7195e-076
AT5G44330.1 male sterility MS5 family protein5752e-059
AT4G20900.1 MS5 (MALE-STERILE 5)5242e-053

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
84  40%
 
126  60%

Unigene MembersMember information