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Information for unigene UN25584

FASTA Sequence
Unigene ID: UN25584Length: 650 SSR 
GGTAACTCAATATGATTATTGAAGATGATTTGTTTCACTAAATTATACTATTCTTTAAAACATTATGACCAGTTTTATCATCAAAA
CGATCCAAAATTTGGAAAAAGGAAACACGGTTTAAGTCTAGTCTCCTCATCGGACACTGCTGGAAGTTTTGAGCGGTCCTTGCTGC
ACAGACCACGGAGGTCGTTTGTTGTCTTCTCTGATGTCTGTGACAGATTTGCAGGAGGAACATCTAACCGATGGAGCTCCATAAGG
ATACATCAGGAGCAGTTCGCAACTGCTGCACTTCACCTGACCAACCTGGTAAGCTTCAAGAACGAGATTAAGAGTCAGACAGCAAG
AGCACTTGACGTGTTTGGTTCCTCGTGGATACGAAAGTAAACGCCTGCAAGATCCACACACCATTTGCGCCTTCTCGGGAATTTCG
ACGGTGGTGGTGGTGGTGGTGGGTAGTGGAGTTCGCGGCGGTGATGACGGCGGAGATCGGAGGAGGAGGAGGAAGAAGAACGATAG
ACTCCCATCCCGGAGGAGGACCTTCCTCCTCCTCTTCTTTCTTCTGAGTTTGCATCTCTTCCATCACGCCTCTGCTCTCGGCTTTG
GCGATCATCACTCTCTCTCTCTCTCTCACACAAACGAAACGACGCTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_193892 lsd one like 2 protein [Arabidopsis thaliana]4524e-043
XP_002869877 hypothetical protein ARALYDRAFT_492714 [Arabidopsis lyrata subsp. lyrata]4524e-043
XP_002273964 PREDICTED: hypothetical protein [Vitis vinifera]3736e-034
XP_002305138 predicted protein [Populus trichocarpa]3522e-031
XP_002519059 conserved hypothetical protein [Ricinus communis]3512e-031

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
O65426 At4g216104523e-043
B9H2V4 Predicted protein3521e-031
B9RZ90 Putative uncharacterized protein3512e-031
B5TV67 Zinc finger protein LSD2-like protein3206e-028
A2WSJ7 Putative uncharacterized protein2776e-023

Arabidopsis top hits (Blast detail)Scoree value
AT4G21610.1 LOL2 (LSD ONE LIKE 2); transcription factor4522e-045
AT1G32540.2 LOL1 (LSD ONE LIKE 1); DNA binding2254e-019
AT1G32540.1 LOL1 (LSD ONE LIKE 1); DNA binding2254e-019
AT1G32540.3 LOL1 (LSD ONE LIKE 1); DNA binding2254e-019
AT4G20380.2 zinc finger protein (LSD1)1663e-012

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
72  67%
 
91  33%

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