Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN25587

FASTA Sequence
Unigene ID: UN25587Length: 793 SSR 
TTTTTAAACTACACGACAGAGAGGAAGCCGCCGCAGAAAAAAAGAAAAACCCTAAAAAAGATGGACGAAGAAAGCAAGGTGAAGAT
CGAGAAAACGGTTCGAGAGATTCTGAACGAATCGGACATGACGGAGATGACGGAGTTCAAGGTCCGCAATCTCGCTTCGGAGAGAC
TCGGAATCGATCTCTCAGACAAGTCTCACAAGGCATTTGTACGAGGCATCGTCAAGTCATTCCTCGACGAAGTGGAGTCCAAACAA
CAACAAGACAAGGATGAGCAAGAAGAAGAAGAAGAACAAAGAGCTAAGGGAGACAAGGAGTTTGACGATGACGGCGATCTCATTAT
TTGCCGGCTGTCGGATAAGAGGAGAGTGGCGATTCAGGAGTTTAGAGGAAAGGCTTTGGTCTCTATCAGAGAGTATTACAAGAAAG
ATGGCAAAGAGCTTCCTTCCTCTAAAGGAATAAGCTTAACAGATGAACAATGGTCAACGTTCAAGAAAAATATTCCAGCCATCGAA
AATGCTGTCAAGAAAATGGAATCGCGTGTCTGAACAACTTGTGGGTTGATTCTGCTTTCATAAACATATATGCAAGTGTCTTGTTG
AATCAGTGGTGCAAATGTTATTATTGTCTTATGTAACTTGTTTTCTTTCTTCGGATTGGTCGTAATGTGTTTCTTAGAGGACCCCT
GGCAAACGAAGCCATTATCATCAGTAGTAGTATCCAATATCGGTTTAACCGTTTCAACATAACCGAATTAGGACATGTATACACAA
CTCTTCCGGACAAAAAAAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAB41214 putative transcriptional coactivator [Brassica rapa]7341e-075
NP_192830 RNA polymerase II transcriptional coactivator KELP [Arabidopsis thaliana]6212e-062
XP_002874654 hypothetical protein ARALYDRAFT_489930 [Arabidopsis lyrata subsp. lyrata]6184e-062
ACU13417 unknown [Glycine max]5611e-055
ACU13185 unknown [Glycine max]5574e-055

Swiss-Prot top hits (Blast detail)Scoree value
O65155 RNA polymerase II transcriptional coactivator KELP6217e-064
O65154 RNA polymerase II transcriptional coactivator KIWI1899e-014
P53999 Activated RNA polymerase II transcriptional coactivator p151469e-009
Q4R947 Activated RNA polymerase II transcriptional coactivator p151469e-009
Q5R6D0 Activated RNA polymerase II transcriptional coactivator p151469e-009

TrEMBL top hits (Blast detail)Scoree value
Q9AVE8 Putative transcriptional coactivator7349e-076
Q0WP62 Putative uncharacterized protein At4g109206211e-062
C6SVZ4 Putative uncharacterized protein5611e-055
C6SVB2 Putative uncharacterized protein5573e-055
B9GL38 Predicted protein4283e-040

Arabidopsis top hits (Blast detail)Scoree value
AT4G10920.1 KELP; DNA binding / transcription coactivator/ transcription regulator6225e-065
AT4G10920.2 KELP; DNA binding / transcription coactivator/ transcription regulator6225e-065
AT4G00980.1 zinc knuckle (CCHC-type) family protein1933e-015
AT5G09250.1 KIWI; DNA binding / protein binding / transcription coactivator1898e-015
AT5G09250.2 KIWI; DNA binding / protein binding / transcription coactivator1413e-009

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
62  50%
 
82  50%

Unigene MembersMember information