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Information for unigene UN25590
FASTA Sequence |
Unigene ID: UN25590 | Length: 958 |
SSR | | AAAACACAGTAATATTTCTTTTGTATTAACTAGAGGATGCTGCTTAAGTTCATTAACAATTACTTATCTTTGTTTTAGTTTCTTCT
TTGTAATGATGCAAGTACACAAACTACAGAGGAGAGGAAGATTAGCTTCAGCTAACTTATGGTTCTCCCTCTAATTTCATTAGCAA
TATTAAGGCTTGGACATGACACGCTGCGTAGGCCCCCAATGGTATATATCAAAACCTGAGTTCCCATTAGTGAGCAGGTTTTGAGG
TAATCCATGAATGCCGCCATCTAAAGGACGGGCTCTTCCGTTCTGGTAGTACTGCTGATTCTGCATAGAAGCAGCTTCATCATCAT
CCAGCGGAAGGCGATCAAACACAGCGTTCATGAATGATGCAGCCATGATAACAACAGGACCAGATGCTATTAGCCCACCAACCCCA
CTCCTCCACCAACAACCTGTCCTTGATGCCCGGCTAAGTAAATGGTGAAACCAGTGATCCCAAGCGGTGCTGGTGGAGGCAAGACT
GATCCTAGCAATGAGAGGATCTCGAAACGTCCGTGTAAAGTCACAATAGCTCCTGATGAAGCTGGCTGCTTAATGTCACATTGGTG
ACGCAACCATTGGCACTGAGTATGCAGAGTCCTTTCTGTTTCCTTCTTGCAAAATCTGCTAAAGCCTCACAGATGTCATTGCCTGG
GCTGATCTCAACGGCATGAGCTCTGAGGGAGTTTGGACTGTCCTGAGTCACAATGATTGGTGGTTTTGGTTTGTTCTTGGAGCCAG
CTGGTCTACCTCTTGGCCTCTTAACCATCCCTCCTTCAATTGATGAAACCGGCTGGACCTCTTTGGGTAATGCTTTCAGGTTGTTG
TTGTTGTTGTCGTTGACTCTCTCTGCTGCTTCTTGGTTCCTCAATGGAAGTAGTGACTTAGATCCTACAGAGGTTGGAGTCAAAGC
TGTACCACCAGC
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GenBank top hits (Blast detail) | Score | e value |
XP_002881881 DNA-binding family protein [Arabidopsis lyrata subsp. lyrata] | 529 | 1e-051 |
NP_181822 AT-hook DNA-binding-like protein [Arabidopsis thaliana] | 500 | 2e-048 |
XP_002300879 predicted protein [Populus trichocarpa] | 342 | 5e-030 |
XP_002527105 DNA binding protein, putative [Ricinus communis] | 331 | 1e-028 |
XP_002307550 predicted protein [Populus trichocarpa] | 329 | 2e-028 |
Swiss-Prot top hits (Blast detail) | Score | e value |
Q9S7C9 Putative DNA-binding protein ESCAROLA | 257 | 2e-021 |
TrEMBL top hits (Blast detail) | Score | e value |
Q9SJG4 AT-hook motif nuclear localized protein 16 | 500 | 2e-048 |
B9GT32 Predicted protein | 342 | 3e-030 |
B9SM86 DNA binding protein, putative | 331 | 7e-029 |
B9H820 Predicted protein | 329 | 1e-028 |
B9GPH9 Predicted protein | 304 | 9e-026 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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