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Information for unigene UN25595
| FASTA Sequence |
| Unigene ID: UN25595 | Length: 1039 |
SSR | | ATCTCTCTCTCTCTACCCTGGCAAGACTCTCTCAGTTCCATGGACGCCTCTCTTCTCTCCTCGGCTCCGGCCGACACCTTCAACGG
CGGCAATGCGGGGGAGCAGATTGCTCCACCGCTTCAGCCACCAGGCACGGATATGACAGGTATATGCTTCAGGGATCAGCTATGGA
TAAACTCGTACCCTCTAGACCGTAACTACGTCTTCGACTACTTCGCTTTGTCTCCTTTCTACGATATCACCTGCAACAACGAGATT
CTTCGTCGGAGATCCGTTCATCCTCTCGATCACTCTCAACTCTCGAAGATGACAGGGTTAGAGTATGTGATCAGTGATGCTACTGA
GCCGAACCTGTTCGTGTTTCGTAAGCAGAAGAGAGATGGTCCCGAGAAAGTCACACCCATGCTAACGTATTATATCTTGGACGGTA
CTATCTACCAAGCTCCTCAGCTTTGTAGTGTCTTTGCTGCCCGAGTTGGTCGGGCTGTTTATCATATTTCCAACGCTTTCTCTGTT
GCTGCATCCAAGTTGGAGACCATTAAGCAGGTTGATGCTAAAAGCCAGAATGAGGCTTCTGAGACAAAGCCTGCTAGTGAGACGGT
TGATCTCAAGGAAGTGAAGCGAGTCGATTTGATTCTTAAGTCGTTATATAGCAAGTTACCCCCAGCACCTCCACCACCACCCTTCC
CTGAAGGCTATGTTAGCCAGGAAGCACTAGGAGAAAATGAAGAAGAGCTTGGAACACAGGGAGGAGAGTCACAGCAGCCTCAAATT
GATCCTATTATCGATCAAGGTCCTGCTAAGAGAATGAAGTTCTAATGCTCAATCAAGATTTCCTTCTTCAACTTTACATGTCAGAT
AAATAGAATCTTAGGTACTAGCAAACACTCTTCTACTTCTTCTAATTTGAACTCGCCATAGGCTATTGTTTACCTCATCACTTCTC
AAATTTTATCAGAAAGTAAGTCATCTCACGGCAACCACTTCAAGGCAACTAATGTGTATTTGTCATGTACTTTATGAAATTGACAA
TTACTAT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002883299 hypothetical protein ARALYDRAFT_479655 [Arabidopsis lyrata subsp. lyrata] | 1144 | 6e-123 |
| NP_188772 RNA polymerase transcriptional regulation mediator-like protein [Arabidopsis thaliana] | 1133 | 1e-121 |
| XP_002331927 predicted protein [Populus trichocarpa] | 899 | 1e-094 |
| XP_002282496 PREDICTED: hypothetical protein [Vitis vinifera] | 871 | 3e-091 |
| XP_002515912 RNA polymerase II mediator complex subunit, putative [Ricinus communis] | 870 | 3e-091 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q54PN3 Putative mediator of RNA polymerase II transcription subunit 6 | 307 | 3e-027 |
| O75586 Mediator of RNA polymerase II transcription subunit 6 | 258 | 1e-021 |
| Q921D4 Mediator of RNA polymerase II transcription subunit 6 | 258 | 1e-021 |
| Q5RD94 Mediator of RNA polymerase II transcription subunit 6 | 258 | 1e-021 |
| Q3SZY9 Mediator of RNA polymerase II transcription subunit 6 | 257 | 2e-021 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9LIG1 Putative uncharacterized protein At3g21350 | 1133 | 7e-122 |
| B9N9I3 Predicted protein (Fragment) | 899 | 1e-094 |
| B9RQ93 RNA polymerase II mediator complex subunit, putative | 870 | 2e-091 |
| A5AE97 Putative uncharacterized protein | 863 | 2e-090 |
| B8B401 Putative uncharacterized protein | 821 | 1e-085 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G21350.1 RNA polymerase transcriptional regulation mediator-related | 1145 | 2e-125 |
| AT3G21350.2 RNA polymerase transcriptional regulation mediator-related | 762 | 4e-081 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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