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Information for unigene UN25611
| FASTA Sequence |
| Unigene ID: UN25611 | Length: 782 |
| SNP | GTCAATAATCTAATCAATTTACTTTAAAATAACATATATATCATGTCAACATAAATTTATTTGTTCGTTTAATCTTTATAGTAAAA
TTATTAAATAAATAATTTTTGGATAACTAATGAGAAACAAGAAACCGATTAATTAATTTAAATTATGCATTAGCACAATTTTTAAA
ACAGATACAATAATAGAAATAGAAGTAATATTTATTCGATTAAGAACTGAAAATAGGTAATTTCAAAGAATGATATAATGATTGAT
GAATATTAAAAAGAGAGGATATATATTCTCCAATTTAAGCATTGATGGGTAAATCAAGCGCATATGAATCCACGGGGGGTCTTCCT
GCCACAAGCATTGAGAAGAAGACTGAGAGAGACAGGAACATTAAGCTTAACTCCTAGGACATTTGCCTTTAAGGCAGTACAGAGAC
AAGCAGCAGCCTCAAGATCAACCAAACCCTTAAGGAGTGAACAACAAGGCTTGACTGGTGGTGTGCCCAATTCGATTTTGAGAAGA
TCCTTGAGTACATTGGCACAAACGCCAAGTTTGAGGGTTTTTCTTGGGCAGCTTCCTGAGGAGGATGGAGTTGGGGTAGGCTTGGG
TTTAGGTTTGGGAATAGAATCGCAGCCACCGCCACAAGCAGTAGTTAGCGTGAAAAATAGGATGTTGAATGTGAGGAGAATTATAA
GGGAGGCTGAGATTTTTGAAGCCATCTTTCCAAAGATATAATTCAATTGAGCAAGTTTTAAGCTGGAAGTATTGCTTTTAGAGAGT
GGTGGTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002874779 hypothetical protein ARALYDRAFT_911652 [Arabidopsis lyrata subsp. lyrata] | 570 | 1e-056 |
| NP_567391 bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin-like protein [Arabidopsis thaliana] | 563 | 8e-056 |
| XP_002874778 hypothetical protein ARALYDRAFT_911651 [Arabidopsis lyrata subsp. lyrata] | 560 | 2e-055 |
| XP_002533299 14 kDa proline-rich protein DC2.15 precursor, putative [Ricinus communis] | 490 | 2e-047 |
| XP_002529775 14 kDa proline-rich protein DC2.15 precursor, putative [Ricinus communis] | 477 | 8e-046 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P14009 14 kDa proline-rich protein DC2.15 | 401 | 2e-038 |
| Q01595 Cortical cell-delineating protein | 297 | 3e-026 |
| Q00451 36.4 kDa proline-rich protein | 232 | 9e-019 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9S7U3 At4g12520 | 563 | 6e-056 |
| B9T4Y0 14 kDa proline-rich protein DC2.15, putative | 490 | 2e-047 |
| Q42487 Extensin like protein | 483 | 1e-046 |
| B9SUW4 14 kDa proline-rich protein DC2.15, putative | 477 | 5e-046 |
| C9E0E8 Proline-rich protein | 472 | 2e-045 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G12520.1 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein | 582 | 2e-060 |
| AT4G12510.1 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein | 582 | 2e-060 |
| AT1G12090.1 ELP (EXTENSIN-LIKE PROTEIN); lipid binding | 409 | 3e-040 |
| AT1G62510.1 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein | 388 | 7e-038 |
| AT4G12480.1 pEARLI 1; lipid binding | 372 | 5e-036 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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