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Information for unigene UN25625

FASTA Sequence
Unigene ID: UN25625Length: 913 SSRSNP
GGAAGAACACTCCTCTTCTAATTGTGCTTATTCTCTCTCCTTCTCTCTCACTTTCTGTAGATTTATACACTGAAAATCAAGTTTCT
GAGTTCAGTTTCTGACAATGGAAGCAAACCTGTTATACGGTTTGTCTACACTTGTTGTTATTCTGTTATTGTCGGTGACTTCGACA
GTGACATCAAAGGACGATGTTGTTTCCTGTACAATGTGTTCTTCCTGCGACAATCCTTGTAACCCCGTCCAGTCATATCCTCCCCC
TCCGCCACCTTCTCGCCCACCACCGTCTCCATCAACCACCACCGCATGTCCTCCACCTCCTTCTCCTCCTAGCTCCGGCGGTGGTG
GTGGTGGTAGCTCTTACTATTACCCTCCTCCTTCTCAGTCCGGTGGCGGAAAATACCCTCCTCCGTACGGTGACGGTGGTCAAGGT
TATTACTATCCTCCTCCGTATTCAGGAAACTATCCTACTCCCCCTCCGCCTAATCCGATCGTCCCTTACTTCCCGTTTTACTATCA
TACGCCACCACCAGGTTCTGGAGCAGATCGGTTTAAGGGTTCTAACTCTATTCTGTTTGCTCTTTTCGCTGTCTTTCTCTGTTTAG
TGTGACGGAAAATAGTCAGAGTTGGCCGGAAAATACCAAGTAATGTGGCAGATCGGTAGATCTACAATAGTCTTTGAAGGTTTTAG
ATATCTGTGATGTTGGATCAAATGATTATCTCTTACTTTCTTTAACCTTTTCTTGTGTGGACAATTTGTATTTAATTTTTCTTGTT
AATTAACATTTTGATTACTAGCTATTCAGAAATAAAGTATTGTTACTTTCTATGCATTATTTCTCTCTTTTTAATGTATTGTATGG
TTGATGTATTGCTCTTTAAGTGGTTTACACTCGAGTTATTTGTTCATCTCAGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_568708 hydroxyproline-rich glycoprotein family protein [Arabidopsis thaliana]7701e-079
XP_002865724 hypothetical protein ARALYDRAFT_494989 [Arabidopsis lyrata subsp. lyrata]7512e-077
XP_002870180 predicted protein [Arabidopsis lyrata subsp. lyrata]4634e-044
NP_193349 proline-rich family protein [Arabidopsis thaliana]4312e-040
XP_002314326 predicted protein [Populus trichocarpa]4161e-038

Swiss-Prot top hits (Blast detail)Scoree value
O53426 Proline-rich antigen homolog1925e-014
P78621 Cytokinesis protein sepA1863e-013
Q54WH2 Formin-A1853e-013
Q54SP2 Formin-B1738e-012
Q5TJ56 Formin-F1674e-011

TrEMBL top hits (Blast detail)Scoree value
Q9FJ12 At5g492807708e-080
O23462 At4g161404312e-040
B9HX94 Predicted protein4168e-039
Q9M7Y1 F3E22.11 protein4024e-037
B9MZZ6 Predicted protein3773e-034

Arabidopsis top hits (Blast detail)Scoree value
AT5G49280.1 hydroxyproline-rich glycoprotein family protein7713e-082
AT4G16140.1 proline-rich family protein4319e-043
AT3G06750.1 hydroxyproline-rich glycoprotein family protein4032e-039
AT1G70985.1 hydroxyproline-rich glycoprotein family protein1862e-014
AT3G22800.1 leucine-rich repeat family protein / extensin family protein1737e-013

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  33%
 
63  50%
 
181  17%

Unigene MembersMember information