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Information for unigene UN25628
| FASTA Sequence |
| Unigene ID: UN25628 | Length: 1069 |
SSR | | GGCAAGGTAACGTTTTACATTATCATAACGCAGAAGAGTAACAATCACAAATCTCTTGAGAGGAAAATTATAGCAAAGCACAATCC
AAGATGACACAGTATTTCATCTACATCAAATCCATTTTATTTGTAGAAACATTAAGTCTTATGAAGAGAGTAATAATAACAAAAGA
TAAATAGAGAGAGAGAGAGCCTCACACTTCAGAAAATAATGTCTGCATCCTTCTCTGCCCCACCTTCAAGCAAGTTACGAGCAGCG
TTTATAGAAATCCCTCTCTGCATAGAGATCCCTTCAAGAACCATCTCCTCAGCAAACGCCTTAGCGTTAGCTGCTTGTCTCTCGAC
TTCCCTCCTCTTGTATCCCTGAATCTTCTTAAGCCTGAAGAAATCTTCCCTCTCAAGCTCGTCAAGCTCTCCCTTGATGTAACTGA
TGGTATTCTCAATCTTCGGTTTCACCACATTCTCCAGGGCGTTGACCCTGCGGTTAGTCGTCTTGATTGCTTCATCAAGCGTCAAG
AACGAAGTCTGGAGAGAAGCAAGCTCAACGAGAACCTCAATAGCTTTCACATAAGCCACACGGCAAGCTTGGACCTGTTGACCACC
TCTGGCTAAACCGGTTAAGTCATTCTTGGTCTCCCCTTCAGAGAAGTGATCAAACTTCGGAAGCTTCACACCAGCGATGTTCTCTT
GCCTCGAACGAACTTTGAGCGTAGCTTCTTTGACGTTCTCGAGGACAACGTGTTTGACATTCTCACCAGCAACGTACTTGACTTCG
GTAAGAGCAAAAGACGACGTCTTCATCATGTCTCCCATTGATTCCTTGGCCGTGACGATTTTTGAGAAAAGCCCTGAATTGAACAG
TTAAAGCATCGCTCTTCTTCTTGAGGAGAGCATGACCTCTTGTCGCTCCAACAAGACGGGCTTTCATAACTCCGAGCATAGTAACA
GTGGGAACCACATTCAAACGCGCGTTTTGGCCAGCCATGTTTCAAAAGAAAAAGCTGGGCCTCTCGAGGAGACTTTTGCAAGTAGA
TCACTGAGATTGATTGGCCTTTGAGAGAAATTGGTCC
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| GenBank top hits (Blast detail) | Score | e value |
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| XP_002878236 predicted protein [Arabidopsis lyrata subsp. lyrata] | 1007 | 5e-107 |
| NP_191432 V-type proton ATPase subunit D [Arabidopsis thaliana] | 1001 | 2e-106 |
| CAB46439 v-ATPase subunit D [Arabidopsis thaliana] | 997 | 7e-106 |
| XP_002523036 ATP synthase subunit d, putative [Ricinus communis] | 882 | 1e-092 |
| XP_002532689 ATP synthase subunit d, putative [Ricinus communis] | 870 | 4e-091 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9XGM1 V-type proton ATPase subunit D | 1001 | 1e-107 |
| P87220 V-type proton ATPase subunit D | 489 | 2e-048 |
| Q86A77 V-type proton ATPase subunit D | 472 | 2e-046 |
| Q9V7D2 V-type proton ATPase subunit D 1 | 471 | 3e-046 |
| Q61IU3 V-type proton ATPase subunit D | 467 | 8e-046 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q0WWD3 Vacuolar-type H+-ATPase (V-ATPase) subunit D | 1001 | 2e-106 |
| B9SAL7 ATP synthase subunit d, putative | 882 | 1e-092 |
| B9T370 ATP synthase subunit d, putative | 870 | 2e-091 |
| B9GJS3 Predicted protein | 857 | 8e-090 |
| A9PGR2 Putative uncharacterized protein | 810 | 2e-084 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G58730.1 vacuolar ATP synthase subunit D (VATD) / V-ATPase D subunit / vacuolar proton pump D subunit (VATPD) | 1002 | 7e-109 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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