Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN25633

FASTA Sequence
Unigene ID: UN25633Length: 842 SSR 
GCTAGAGGTAGATCAATAAAGCACAACAATACCAATCACAATTTTTTTCTCTTATTGGTAATCCACATGTCCAATAGTTCACACAC
GTTGAAGCACAACGCTTCTTATAACCTCCTTAGCTCTTTCGGCTCAGAAAATCTTAACAAAAACTGCTCAAAACGACATACTGTAC
CATGTTGCCAACGAAAAATAGAATCCACGAATTGGTTTTTTTTCCCATGTTATAAGAAGCCCCACACAGATACAAACTCTCTAATG
TTTCTCTCTCTCTCTCTTGTGACTCTTTTGCACTTCGTTTAATCTTGCAAAAGAAAAATGGTGTCTCAGGCGCCTTCTTCTGCCTA
AAAACTCTATTTGTTCTTTGCAATGAATAAGATAAGAGCACATCTTTTTTTGATTTGAGACTAACCGGTGTACAATCAAACACTAC
ACTTGATATCTCGCAAGCCTTTCTTTTACAGGAGGATCCAAAGCAGACCAACATTCCGCCCATGAGTCTCCAAGCATTTGTTTATA
GCCGTTCAGCACTTGGGAGACTTCGTTATTGACGTCCTCGGTTCTTATTTCATGCCAGCTTGCAATGGCTTTGCATATGAAAACAA
GTGAGCTGACACCTCCTGATGGATTCGCTTTTACCACTGCACATAACCCTCTAAATGCATCTTCTTTCTCAAGGTCATCACGTACC
ATTGCCAATGCCAAGCACCATGGTTTCATGAAGTGCTCCATGTGAGGTGCAACGAGGTCTGGACGAATCCATGCTAGTCTACCGAG
GGTAATTGCACTGTTCTCAACTAGTGATTTATTAACAGCCTCTCCATGCTGAAGAATCAGGGCTAGGG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002884024 protein transporter [Arabidopsis lyrata subsp. lyrata]6589e-067
NP_001031359 transportin 1 [Arabidopsis thaliana]6552e-066
NP_179287 transportin 1 [Arabidopsis thaliana]6552e-066
CAC80068 transportin [Arabidopsis thaliana]6552e-066
CAD56216 transportin-like protein [Cicer arietinum]5612e-055

Swiss-Prot top hits (Blast detail)Scoree value
Q3SYU7 Transportin-12874e-025
Q92973 Transportin-12874e-025
Q8BFY9 Transportin-12874e-025
Q99LG2 Transportin-22785e-024
O14787 Transportin-22598e-022

TrEMBL top hits (Blast detail)Scoree value
Q8H0U4 At2g169506551e-066
Q8H2D6 Transportin6551e-066
Q8GTE6 Transportin-like protein (Fragment)5611e-055
B9H1L0 Predicted protein5117e-050
B9HR27 Predicted protein5091e-049

Arabidopsis top hits (Blast detail)Scoree value
AT2G16950.1 TRN1 (TRANSPORTIN 1); protein transporter6566e-069
AT2G16950.2 TRN1 (TRANSPORTIN 1); protein transporter6566e-069
AT2G16960.1 importin beta-2 subunit family protein3611e-034
AT2G16960.2 importin beta-2 subunit family protein3611e-034

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
62  67%
 
201  33%

Unigene MembersMember information