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Information for unigene UN25645
FASTA Sequence |
Unigene ID: UN25645 | Length: 798 |
SSR | | TTTCAGAGGAGATAGCATATCAGAACAGGATGATCCTCAAAACTTGAGTTGAACATATGATTAATGTGAGGAAAAATTTGGGGACT
ATAAGTGTTAAATTCTCACATTTTTATGATGAGGAGGAACCAACCAGATATGCTGGCTTTGTAAAAATCTTATCAGCGTAATTCGG
GTGACATTATGAAGTGGTAACAAGAGCAAGAGAGGATATGATTCTTATTTTGAGGTAGGAGTTGTCTTAAAGAGGACCAGGGAAAG
TTCCATTCTCTCTTTGCTCGTTCCACCTATCAACCCATTCGCCGGGGCAAAGAGAACGATAAAACTTTGAAAACTTGTCGCACTCT
GGAGCATCGTCGCCCTTGGCAGCTACACATCTGTGATATTCAATGTAACGTGTGAAACAATGCCTGGTTTGGTTAGTTGTCGGGAA
ACGGAAATCAGCAGGAGCTGTCTCAAGCTTGATCTCATCAGGAGTCTCCTCAGCAACTTCTTCAGTAGTGTTTTCTTCTTCAGTAG
CCGCAGCAGGAGCCTCTTCAGAAGTGACTTCCGTGGAAGCGGGAGACTCGGACTTGTCTTCAACAGCTTCCTCAGGAGGAGGAGAA
TCTTCCTTGGCTTCAACCTCTTCAGCTTGAACTTCAACAGGCTTCACTTCTTTCTCCAAATGATATTGCTCGGAGAGCGACGGAGT
TTGAGCAGAAACCGATTCCGCCATTTGAAGTGTGTGAACTCAGGAGAGCGACTGAGGATCTTTTGATGGTTCGGTAGGTTTAAGCT
CTCTCTCTCTCTCTCTCGGACTCC
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GenBank top hits (Blast detail) | Score | e value |
NP_173661 cytochrome C oxidase 6B [Arabidopsis thaliana] | 570 | 1e-056 |
AAM63485 cytochrome c oxidase subunit, putative [Arabidopsis thaliana] | 567 | 3e-056 |
XP_002890515 hypothetical protein ARALYDRAFT_889753 [Arabidopsis lyrata subsp. lyrata] | 550 | 3e-054 |
NP_001050275 Os03g0390400 [Oryza sativa Japonica Group] | 496 | 5e-048 |
AAM92706 putative cytochrome c oxidase subunit [Triticum aestivum] | 495 | 7e-048 |
Swiss-Prot top hits (Blast detail) | Score | e value |
O94581 Cytochrome c oxidase subunit 6B | 272 | 2e-023 |
P14854 Cytochrome c oxidase subunit 6B1 | 223 | 1e-017 |
Q5RCT0 Cytochrome c oxidase subunit 6B1 | 221 | 2e-017 |
P00429 Cytochrome c oxidase subunit 6B1 | 217 | 5e-017 |
Q7YRK6 Cytochrome c oxidase subunit 6B1 | 217 | 5e-017 |
TrEMBL top hits (Blast detail) | Score | e value |
Q9S7L9 Putative cytochrome c oxidase subunit | 570 | 9e-057 |
Q8LCP1 Cytochrome c oxidase subunit, putative | 567 | 2e-056 |
Q9SXV0 Cytochrome c oxidase subunit 6b | 496 | 4e-048 |
Q8L808 Putative cytochrome c oxidase subunit | 495 | 5e-048 |
A9PHL0 Putative uncharacterized protein | 491 | 1e-047 |
Arabidopsis top hits (Blast detail) | Score | e value |
AT1G22450.1 COX6B (CYTOCHROME C OXIDASE 6B); cytochrome-c oxidase | 570 | 6e-059 |
AT5G57815.1 cytochrome c oxidase subunit 6b, putative | 371 | 7e-036 |
AT4G28060.1 cytochrome c oxidase subunit 6b, putative | 352 | 1e-033 |
AT1G32710.1 cytochrome c oxidase subunit VIb family | 163 | 9e-012 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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