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Information for unigene UN25668
| FASTA Sequence |
| Unigene ID: UN25668 | Length: 702 |
SSR | SNP | GGAACACAAGCAAAAAAAATTAAAGGTTGTCTAGTTGTGTAAACAAAAAAAGAGAGATAGAGAAAAATGGCTAGCTTCACTGCCTC
CGCTTCCACCGTCTCCGTCGCTCGTCCTGCTCTCCTTCTCAAGCCCACCGTCGCCGTCTCTGCTCCTGTTCTTGGTTTGCCTCCAA
TGAGTAAGAGGAAGGGAGGAGTGAAGTGCTCGATGGAGACCAAGCAAGGAAACGTGTCAGCCGTGGGAGCTGGAGTTTCTGCGGCG
GCTACAGCAGCTTTGACGGCTGTGATGAGCAGCCCGGCTATGGCTTTGGTGGATGACAGGATGTCAACGGAGGGAACCGGCTTGCC
CTTTGGTCTGAGCAACAACCTCTTGGGTTGGATTCTTTTAGGAGTGTTTGGTTTGATCTGGACTTTCTACTTCACCTACACTTCAT
CTCTTGACGAGGATGAAGAATCTGGTCTTTCACTCTGAACATGAATTCTAGATATGTCCTTCATCAGTGTTCATCTCTCTCTCTCC
TTTTCCATTTTCATTTGAGGACATGAATCATGAACGATCTTCTGGTTTCTTGTAATTTTAAGTACACCCAAAAAAACTATTTTCAT
GTATACATCCTAAGACAAATATAAATTTTCATGAATAATAGAGTAACTCTAAAATATTTAGGGCTTATTGCAAAAGTGACTCAAAA
CTTGAATTCAAACG
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| GenBank top hits (Blast detail) | Score | e value |
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| ABL97943 component of 6.1 kDa polypeptide of photosystem II reaction center [Brassica rapa] | 643 | 4e-065 |
| XP_002881119 hypothetical protein ARALYDRAFT_902045 [Arabidopsis lyrata subsp. lyrata] | 616 | 5e-062 |
| CAA62296 component of 6.1 kDa polypeptide of photosystem II reaction center [Arabidopsis thaliana] | 613 | 1e-061 |
| NP_180615 photosystem II reaction center W protein [Arabidopsis thaliana] | 613 | 1e-061 |
| AAL16242 At2g30570/T6B20.8 [Arabidopsis thaliana] | 513 | 4e-050 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q39194 Photosystem II reaction center W protein, chloroplastic | 613 | 5e-063 |
| Q41387 Photosystem II reaction center W protein, chloroplastic | 368 | 1e-034 |
| Q5ZBY9 Photosystem II reaction center W protein, chloroplastic | 286 | 4e-025 |
| Q9SPI9 Photosystem II reaction center W protein, chloroplastic | 172 | 7e-012 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A1YMY4 Component of 6.1 kDa polypeptide of photosystem II reaction center | 643 | 2e-065 |
| Q41908 Photosystem II 7kD protein | 574 | 2e-057 |
| Q944K9 At2g30570/T6B20.8 | 513 | 3e-050 |
| C6SWM3 Putative uncharacterized protein | 393 | 2e-036 |
| C6SYI0 Putative uncharacterized protein | 392 | 3e-036 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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