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Information for unigene UN25675
| FASTA Sequence |
| Unigene ID: UN25675 | Length: 534 |
SSR | | CTCTAAAATAAAATTGAACCTGATTGATTCATTATCTTTGTGGGTTTTGTCACCATATCTAACGGCAAATTCTAGGGGTATAGCGA
AATAAACAGTAACGTATAAAATAGAATGCAATTACTGGAAACTGATCTCAAATGTGTGGTTAACATATGTTTCCTCTTTCTGAGTA
TCTGAACAAAACAAAAAACTGTGAAATTGTTTTCTTGAAACAAGAAAGCTGTTTCTACCCTTCTTCTTCTTCTTCTTCTTCTTCGC
TGGTTATCTAGGTGGCACCGACGATGATGTTGTTGATGGGAATAAAAATGAGCTTCACAAAGAATCCCACGAATCCCATTACTACA
AACCCGATCGCTGTACGGACCGCCACTTTCGTGAATTCTTTGCGATCTGGTTTGTGACAACGCTTAACGAGGCGAATGCTGTCCTT
TGCAAAGTCTCTGAGAGGATCAACGACGGGATCGATGGCGTCCATGGCTCTTTCTTTGACGACTTTTTTTTATATTTGTCTTCCTT
TTTTGGTTTGGGCCCCCC
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| GenBank top hits (Blast detail) | Score | e value |
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| NP_194222 protein transport protein sec61 subunit gamma-1 [Arabidopsis thaliana] | 344 | 8e-031 |
| NP_001148682 protein transport protein SEC61 gamma subunit [Zea mays] | 331 | 3e-029 |
| NP_001147308 protein transport protein SEC61 gamma subunit [Zea mays] | 330 | 3e-029 |
| XP_002318732 predicted protein [Populus trichocarpa] | 327 | 8e-029 |
| XP_002451650 hypothetical protein SORBIDRAFT_04g005280 [Sorghum bicolor] | 327 | 8e-029 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SW34 Protein transport protein Sec61 subunit gamma-1 | 344 | 5e-032 |
| P38385 Protein transport protein Sec61 subunit gamma | 326 | 6e-030 |
| Q9SMP2 Protein transport protein Sec61 subunit gamma-3 | 316 | 8e-029 |
| Q7Z1B8 Protein transport protein Sec61 subunit gamma | 262 | 1e-022 |
| Q8I7D9 Protein transport protein Sec61 subunit gamma | 257 | 6e-022 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B6SPI4 Protein transport protein SEC61 gamma subunit | 331 | 2e-029 |
| C5Z769 Putative uncharacterized protein Sb10g026000 | 331 | 2e-029 |
| B6SPB6 Protein transport protein SEC61 gamma subunit | 330 | 2e-029 |
| A9P9P6 Predicted protein | 327 | 5e-029 |
| B6TB44 Protein transport protein SEC61 gamma subunit | 327 | 5e-029 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT4G24920.1 protein transport protein SEC61 gamma subunit, putative | 345 | 4e-033 |
| AT5G50460.1 protein transport protein SEC61 gamma subunit, putative | 345 | 4e-033 |
| AT3G48570.1 protein transport protein SEC61 gamma subunit, putative | 317 | 6e-030 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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