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Information for unigene UN25688

FASTA Sequence
Unigene ID: UN25688Length: 1359 SSR 
GGAGTGCTCCACTCAATCTTCTTCTTTCACCAAAACAACAACTGCTAGGGAGAGAGAGAGAGAGAGAGAGAGAGAGCCAAACTCCA
TCCCTCAAGCTCTCAAGAGAATCAAGCTCCAAATATGAGCAGTTTCTACGAGCATTACGAGTTCCCATACGATACCAACCAGGTTA
ATCATCTCTATGATCATAACTATTATGATAACAATCAACATCAGCAGTTTGGTTTTGATCCAATGAGTTACAATAATAGTTATAAT
AACTGGAATGGATCTGAGTATGAGTATGAGACAGCCTCTGCATCTGTTGCTTACTCTGTCTCCACCATGTCTGAGCCGAAGCACTT
GTTCTATGATCCGAGTTACTACACAACGACAACCTATGAGTCTCCTCCCCAGTTTAGTATTTATTGCAATGTCCAAGGCTTCAATG
AGCCGGAGTTCGAAGAGTACGATCCGACGCCATACGGTGGTGGCTATGATATCGTTGCGACATACGGGAAACCTCTTCCTCCATCG
GTGAATACTTGTTACCCTTCTTCAACCGCTGATCAGGGTAAACCTCCTTCTCCTCCGGAGATCATCGCTCCTGTTCCTCTTGGAAT
CTATGGTGGTGGTGAAGAAAAGAAAGCTGTCAAGAAACGTGTGACTTTCTCTGAGCCGTTAGAGGAAGCTAAACCATTAGAAACCA
TTAAAGAAGAAGAACATGATCATCAAGAAGAGGCAGAGGAAGAGGATGAAGAAGGTGAGGATGAAGAGGAAGAAGAAGATCACGGT
TCAAGCAATGAAACTGTAGACAAAGTTGAAGTGAAAGCTCTGTATGTTCCGTCTGGTTACGGCTTAGAAGCTACGGATCTCTGCGA
GGTTATATTCGGAGGCTATTTTCCTTGCGTCTTACGTAACAAAAGACGCCAGGAGGATGAGAATCGTGCGGCTGAAGTTACTTGCT
GGGAGAGCACAGATTCTGATCCTTGGAAGACGACTTCAGACTACCTTTTCGGGGATCCGTATCCGTATGGTTATGAGGATGGAGTT
GGGAGAAGACAGTTCGAGATCTCCTCTTATGGTTATCTGAGGTATTAACTGGAGTTATCACGATCATCAGATGTGTCAAAGTTATG
TGGTGAGAGCAATATTTTTTTGATAATTGATGAAGCTGATTCGTTTTAGTATATACAATGACCTTTCTTGTATGGTTGGTCCAACG
TTATTATGAAAAGATATTCCAGGTTGATCGATCAATAAATGTTACAAAAACATCTCCTAATTCTGCCATCTCTACCATTTAAATAT
CTTAGTATTGTTTTATTGTAATGTTTTAAAGTAAACTATTGCAAGAAAGAATTTTATAGTTTGTTTCTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_172611 uncharacterized protein [Arabidopsis thaliana]11001e-117
XP_002889868 hypothetical protein ARALYDRAFT_471281 [Arabidopsis lyrata subsp. lyrata]7173e-073
XP_002518589 conserved hypothetical protein [Ricinus communis]4216e-039
XP_002316699 predicted protein [Populus trichocarpa]2962e-024
CAN76854 hypothetical protein VITISV_006002 [Vitis vinifera]2576e-020

Swiss-Prot top hits (Blast detail)Scoree value
Q9FKA5 Uncharacterized protein At5g395701481e-008

TrEMBL top hits (Blast detail)Scoree value
Q9LPZ0 At1g1144011007e-118
B9RXX0 Putative uncharacterized protein4214e-039
B9HYT2 Predicted protein2961e-024
A5BG40 Putative uncharacterized protein2574e-020
B9H1W5 Predicted protein2208e-016

Arabidopsis top hits (Blast detail)Scoree value
AT1G11440.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT3G29075.1); Has 22740 Blast hits to 8622 proteins in 417 species: Archae - 22; Bacteria - 573; Metazoa - 11353; Fungi - 2147; Plants - 905; Viruses - 631; Other Eukaryotes - 7109 (source: NCBI BLink).11013e-120
AT3G29075.1 glycine-rich protein1416e-009
AT5G03710.1 unknown protein1149e-006

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
85  56%
 
122  22%
 
72  22%

Unigene MembersMember information