 |
Information for unigene UN25713
| FASTA Sequence |
| Unigene ID: UN25713 | Length: 969 |
SSR | | CCTCTGTCACATGTTTCACATATTTTCGAAAATAAAGAAATAAAAACAGAGAAGTAACAAAATAAATAAAGGTTTTAGCTCGTTTC
GAATAAGAAAAAATAACAACATTTTGTAATTATTATATTGTTTCACAAATTGCAGAAAACGTTTTCATCTGAGAATATTAAACCGA
ATATTACTAATTCGGTAATTCCACATAAACCAGCTCCAACAGCTCCAACAGTAATCTCTTAGCAGAAGAACATTCTGGATCAGACG
GAGAGTTCGGTCTTGGAGATCAAGATACCATCACTATCAGCATAAAGCCATTCACCATCTCTAATCAAAGTCCCTCCAATATAAAC
CGGCACATTCTTCTCACCCTGACCTTTCTTACTAGACTTCAACGGGTTAGAACCCAATGCCCTAACCCCAACATCACAGTCATTGA
TTTCATCCACATCTCTAACGCACCCATTCACCAAAATCCCTACCCACCCGTTGTTCTGAGCTAACTGTCCGAGGTTTCCTCCAACA
AGCGCGCATCTCATGCTTCCACCACCGTCTATAACTAAGACTGCGCCTTCTCCTTTTGTCTCTAGTTGGTTTCTGACTAGGACGTT
GTCTTCAAAGACCTTGAGTGTCACGATTGGTCCGGAGAAGCATCTTCTTTGTCCATAGATCTTGAAGATTGGTTGGAGAGCCCGTA
GGTCTCCGTTTGATATTAGTTCTGCGTTGCTGTCACACGCTTCTGCTGTTGCAAATGCAGCCATGGGAGATTGTATTCACGCGTGT
CGTGTGTGTGTGTGTGTTCAAGGAAAGAGAGAAGGGCTTCCAAAGATTCTTAAACGGCGATTGTATATACAAGTAAGTAACGGGTA
AGATCAGCTTTCTCGTGTCAGGCTATCCAACGCACTGAAAAATCCTCATAGAAACTTGTGCCATTACAGCCACTTGGTCTCCTATC
GTGCCATTTACAGCCACTTGTCC
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_200437 Regulator of ribonuclease-like protein 3 [Arabidopsis thaliana] | 827 | 3e-086 |
| XP_002866134 dimethylmenaquinone methyltransferase family protein [Arabidopsis lyrata subsp. lyrata] | 820 | 2e-085 |
| XP_002529206 Regulator of ribonuclease activity A, putative [Ricinus communis] | 727 | 1e-074 |
| XP_002265968 PREDICTED: hypothetical protein [Vitis vinifera] | 698 | 3e-071 |
| CAN79693 hypothetical protein VITISV_040370 [Vitis vinifera] | 693 | 1e-070 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9FH13 Regulator of ribonuclease-like protein 3 | 827 | 1e-087 |
| Q9FFE0 Regulator of ribonuclease-like protein 2 | 615 | 5e-063 |
| Q9M8R9 Regulator of ribonuclease-like protein 1 | 607 | 4e-062 |
| Q46ZV6 Regulator of ribonuclease activity A | 518 | 9e-052 |
| B2SXN2 Regulator of ribonuclease activity A | 509 | 1e-050 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9ST87 Regulator of ribonuclease activity A, putative | 727 | 8e-075 |
| A5C5H1 Putative uncharacterized protein | 693 | 7e-071 |
| B9N5J4 Predicted protein | 682 | 1e-069 |
| B6SMX7 Putative uncharacterized protein | 653 | 3e-066 |
| B6T0A4 Regulator of ribonuclease activity A | 652 | 4e-066 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G56260.1 dimethylmenaquinone methyltransferase family protein | 828 | 9e-089 |
| AT5G16450.1 dimethylmenaquinone methyltransferase family protein | 616 | 3e-064 |
| AT5G16450.2 dimethylmenaquinone methyltransferase family protein | 616 | 3e-064 |
| AT3G02770.1 dimethylmenaquinone methyltransferase family protein | 608 | 3e-063 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
