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Information for unigene UN25720
| FASTA Sequence |
| Unigene ID: UN25720 | Length: 738 |
SSR | | GCATGAAACATTTGGTATTGAAAATGAAATACATTTTATTTCTTCAAACATCTTTACAAATGTTTGGATCATATTTATTTTCACTG
TATATAATAAAAAATCTAAGATTCTGTAAAATGGGGAACTCATGAAACTTTTTCACCGGTGGTCTTACGTCCCCTGGCTTCTTTCT
CCTTTCTTCTTCTTCTTCTTCTTCTTCTTCCCCGTATAGTCAACACAAAGTTCACTAATTATGTCTGTCCCTTGTTCTTGTTCTTG
TTCTTGTTTTAGATTGATAGTCTCTTGGTGAAAGGTTTTTGGCAGATGAGGAGTCTATGTTCACTGCTGCTTTCAACCTCTATGAC
TCTAGCTTCCCACTTCAACTGCGTTGTCAAAGCTCTTGCAGCTTCCACCAGCTGTGCCGTGTCACGTATTATCACCCATCCCTCTG
GACGAAGTAATCTATCGATCTCTGTGAATATGTTCAGAAGCGAGCATGAGCTCCGGTGCTGACTTGTCTGGAGAGACAAAAGATTG
TCTGCGTGGACAAGGTCATATGTTCTTGGATAACTAGGGAACGCCTCACACCTGAAAGTTTGTACAAAGACAAGTTGAGAGAAACT
ATGAGAAGACAAAGAATAGTTGTTATGACTCTCACCAGTCGTGTAAAACACCGACGAAGCCACGGTCAAGGATCATAGGGAGGTGG
TTAGGTCCAGCAGCCGTAGGGACAACATTCATGACCCAGACTGTTTTCTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| ABV89659 dehydration-responsive protein-related [Brassica rapa] | 454 | 3e-043 |
| XP_002889181 hypothetical protein ARALYDRAFT_895718 [Arabidopsis lyrata subsp. lyrata] | 449 | 1e-042 |
| NP_177948 putative pectin methyltransferase QUA2 [Arabidopsis thaliana] | 434 | 7e-041 |
| AAG52090 unknown protein, 5' partial; 69506-67937 [Arabidopsis thaliana] | 434 | 7e-041 |
| XP_002306570 predicted protein [Populus trichocarpa] | 379 | 2e-034 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9C9Q8 Probable pectin methyltransferase QUA2 | 434 | 3e-042 |
| Q3EC77 Probable methyltransferase PMT5 | 299 | 1e-026 |
| Q8GYW9 Probable methyltransferase PMT4 | 290 | 2e-025 |
| Q84TJ0 Probable methyltransferase PMT6 | 204 | 1e-015 |
| Q9C6S7 Probable methyltransferase PMT20 | 199 | 6e-015 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A8IXV9 Dehydration-responsive protein-related | 454 | 2e-043 |
| B9H723 Predicted protein | 379 | 1e-034 |
| B9RJL5 S-adenosylmethionine-dependent methyltransferase, putative | 372 | 7e-034 |
| B7FM25 Putative uncharacterized protein | 357 | 4e-032 |
| C5XYD4 Putative uncharacterized protein Sb04g027500 | 345 | 1e-030 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G78240.1 TSD2 (TUMOROUS SHOOT DEVELOPMENT 2); methyltransferase | 435 | 2e-043 |
| AT1G78240.2 TSD2 (TUMOROUS SHOOT DEVELOPMENT 2); methyltransferase | 435 | 2e-043 |
| AT2G03480.1 dehydration-responsive protein-related | 299 | 1e-027 |
| AT2G03480.2 dehydration-responsive protein-related | 299 | 1e-027 |
| AT1G13860.2 dehydration-responsive protein-related | 290 | 1e-026 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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