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Information for unigene UN25728

FASTA Sequence
Unigene ID: UN25728Length: 1280 SSR 
GGGGGAGGAGACGAATCAAATCAAAGGGGAAGGATAATCTATAAATATTGGTCGGAATCCTTTGCAATCATTTCGTTTGCGCGTGC
GAGGGGTCTATCGAAATCTCTCTCAAGGCTCTGTGTTTGATAAGAATCTCGAAGAAAAGCTAGGGTTAAGGGTTTGTTCGGCGAGT
AAAAGAAGATGCTGCAGTCTCCGCAAATGTTTCCGACGATGGTTCCTTCGATTGCGTCATCGAACATCACCACAGAGCAGATCCAA
AACCACCTTGATGAGAACAAAAAGCTGATAATGGCAATCATGGAGAACCAGAATCTGGGGAAACTTGCAGAATGTGCACAGTACCA
AGCTCTTCTCCAGAAGAACTTAATGTACCTCGCTGCTATTGCTGATGCTCAGCCTCCTCCACCTACAACAGGACCTGCACCAGCAC
CAGCTATGGCTTCTCAGATGACGGCAGCACCACATCCTTCGATACAACCGCCGAGCTACTTTATGCAACAACACCCACAAGCTTCA
GGGATGGTGGCTCAACAACAAGCATTTCCCGCCGGCGGTATTTTCCCTCCAAGAGGTCCTTTGCAGTTTGGTAGCCCTCACCAGCT
TCATGGGTGGGATTAGACCCATTCCAATGGGTATCAACAACAACATTGGGATGCAGCATCAGATGCAACAACTGCCAGAAACCTTT
CTTGGAGGAAGTGCTGCAAACGTGGGGCTTAGAGGTGGCAAGCAAGATGGAGCAGATGGACAAGGGAAAGATGATGGCAAATGAAA
AGAGGATCCAAAGAAGCTTTGTTTCGTTTATATATATATATTTTAGGACTTGTGCTTTCGGCTTTTGCATCAATTTTCTTTAGCAG
AAGATGATATAGAAGTGGAGTTTGGTTCCACAAACGGTGTTGTGACATTATTTAGTACAAGTTCGGTTTGGTTTAGAAACATCATA
TCATTGTTCTCATTCATCTTACGCTTACAACCCAAAAAAAGCATTGATCTTTCCTTTTATTCTGGACGAAACTTGACGATGAAGTT
CTGACGGCTGATGGGATTCATGACGACGGGAGGGCCAGCGGTTCTTGGCCAAGCTTGGAACTTCTCATCTGTCGCCTTCCACCATT
CCTTGTTGGAAACTGTTCCTGGAGTACTCCCTCCAAAGATCTTATTATCAAAAATAAGTTTGTCAAAAAGGTATGAAATTCCGAAA
GAGCCGATGAAAGCACCGATTATGTACTTGGCTTTACCTCCTGTTGATGCTGCCATTTTATTCTTTAACAGAAAAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002892085 hypothetical protein ARALYDRAFT_887341 [Arabidopsis lyrata subsp. lyrata]5632e-055
NP_563619 GRF1-interacting factor 2 [Arabidopsis thaliana]4512e-042
AAB62864 contains region of similarity to SYT [Arabidopsis thaliana]4422e-041
NP_567194 GRF1-interacting factor 3 [Arabidopsis thaliana]4422e-041
ACF23030 ST103-2 [Eutrema halophilum]4091e-037

Swiss-Prot top hits (Blast detail)Scoree value
Q62280 Protein SSXT1722e-011
Q08E31 Calcium-responsive transactivator1604e-010
Q6DDK1 Calcium-responsive transactivator1596e-010
O75177 Calcium-responsive transactivator1587e-010
Q8BW22 Calcium-responsive transactivator1587e-010

TrEMBL top hits (Blast detail)Scoree value
Q9MAL9 At1g01160/F6F3_14511e-042
O23091 AT4g00850 protein4421e-041
Q93VH6 AT4g00850/A_TM018A10_224421e-041
B4YYB3 ST103-24099e-038
Q2HIQ2 At1g011704001e-036

Arabidopsis top hits (Blast detail)Scoree value
AT1G01160.1 SSXT protein-related / transcription co-activator-related4517e-045
AT4G00850.1 GIF3 (GRF1-INTERACTING FACTOR 3); protein binding / transcription coactivator4427e-044
AT1G01170.1 ozone-responsive stress-related protein, putative4014e-039
AT1G01170.2 ozone-responsive stress-related protein, putative4014e-039
AT1G01160.2 SSXT protein-related / transcription co-activator-related3737e-036

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
93  100%

Unigene MembersMember information