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Information for unigene UN25748
| FASTA Sequence |
| Unigene ID: UN25748 | Length: 753 |
SSR | | GGGACTTCACAAAATCGTCCCTTCGATTTGCTTCGCCCTACGTTTCTGTTTCGGTTTCTCTTTCTCTTCCTGTCCGTTCAGATCTT
CGTCTCCCGATTTGTGGAATTTCTGTCAAAGGGTCTGCTCTAACATGTCAGGAAGAAAGGAAACAGTGTTAGATTTGGCTAAGTTT
GTTGATAAAGGTGTGCAAGTTAAGCTCACCGGTGGTTGACAAGTCACTGGAACTCTCAAGGGCTATGATCAGTTGCTCAACCTTGT
TCTGGACGGGGCTGTTGAGTCTGTGCGAGATCATGATGATCCTTTGAAGACTACCGACCAAACAAGACCTCTTGGTTTAATTGTTT
GTCGTGGAACTGCGGTGATGCTCGTCTCACCAACGGATGGCACTGAAGAAATCGCTAACCCGTTTGTCCAACCAGAGGCTGTCTAA
AGTGTTTCTTTCAATACATAATCTCTCTCTCTCTCTCTCATTTATGTTTTTTAAGTTGGGGTTTTTTAGAGGGTATTATGCATCAA
AGTATTTGCCATGGAATTGGAAACAATTATTTTAATGGGCTCAGGTCCGACTCTGCCTAACAATTAGAGTGTGATTTGAACTGTTT
CTGAGTTTGATCATTGAACAAAATGAAGTTGGTGGTAACAAACCTCAAGCTCCTTGTACCAGTCCTCTTGTTATGGTGTTCTTATA
GCTCCGCCAAGAGACATTGTCTTTGGGCATGGTCTGCGACTTACTCTGAGCTCACACTTCTCAGC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002875234 hypothetical protein ARALYDRAFT_484298 [Arabidopsis lyrata subsp. lyrata] | 462 | 4e-044 |
| NP_178480 U6 snRNA-associated Sm-like protein LSm7 [Arabidopsis thaliana] | 456 | 2e-043 |
| XP_002299952 predicted protein [Populus trichocarpa] | 443 | 6e-042 |
| ACU14702 unknown [Glycine max] | 440 | 1e-041 |
| XP_002263488 PREDICTED: hypothetical protein isoform 3 [Vitis vinifera] | 436 | 4e-041 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9UK45 U6 snRNA-associated Sm-like protein LSm7 | 296 | 3e-026 |
| Q9CQQ8 U6 snRNA-associated Sm-like protein LSm7 | 295 | 4e-026 |
| Q54HF6 Probable U6 snRNA-associated Sm-like protein LSm7 | 278 | 4e-024 |
| O74499 U6 snRNA-associated Sm-like protein LSm7 | 260 | 5e-022 |
| P53905 U6 snRNA-associated Sm-like protein LSm7 | 188 | 1e-013 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9SI54 At2g03870 | 456 | 1e-043 |
| A9PBG1 Predicted protein | 443 | 4e-042 |
| C6SZM9 Putative uncharacterized protein | 440 | 1e-041 |
| B9RHF7 Putative uncharacterized protein | 434 | 5e-041 |
| D5AC71 Putative uncharacterized protein | 426 | 4e-040 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G03870.2 small nuclear ribonucleoprotein, putative / snRNP, putative / Sm protein, putative | 457 | 7e-046 |
| AT2G03870.1 small nuclear ribonucleoprotein, putative / snRNP, putative / Sm protein, putative | 457 | 7e-046 |
| AT2G23930.1 SNRNP-G (PROBABLE SMALL NUCLEAR RIBONUCLEOPROTEIN G) | 119 | 1e-006 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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