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Information for unigene UN25778

FASTA Sequence
Unigene ID: UN25778Length: 1196 SSR 
AACCAACCCAACATTTCTCCCTCGTGACAAATCTCAATTTTGCAAGAAGAAGAAGAAGAAGAAGAAGACAGAAACTGAAACTGAAA
CGTAGTTTTCTTATAATGATGTCAAGTTCTATGGAGTATTCTGATTCCGCCGCTACTCGGAGATTCTCTAGAAAGCCGGGCTTCTC
CCTTACGTGTAGTCGGCTGAGTCAGTACCTGAAAGAGAACGGTAGCTTTGGAGATCTCAGCTTAGGGATGTCATGCAAGCCTCAAG
TCAACGGCAACTCACGTCAGCCCACAACAACAATGAGTTTATTCCCCTGTGAAGCTCCTTCCATGACGACTGGTCAAGATGTTAAA
CCGGAGAATCTGTTTACTCGGCAACCAAGCTTCTCTTCCTCATCTTCCTCTCTCCCCAAGGAAGAAGATGTCCTCAAAACGACACA
AACCATTACTACTACTAGATCTGTGAAACCAGAGCCTCAAACTGCACCGTTGACTATATTCTACAACGGGGAGGTGATTGTGTTCA
ACGACTTTTCTGCTGAAAAAGCCAGAGAAGTGATGAACTTGGCTAGCAAAGGAACCGCTAATAGCTTCACCGGTTTCACATCTACT
CTTAACTTAGCCAAGAATCAAACCGAGGTCAGAAGCAACATCGCTCCTACCTCTAACCAAGCTCCTCATCTCATGAAAACCGCAGC
ACAACAAGAGCCAATAATGTCCTCCTCAACTGCAATGGCATGCGAACTTCCTATTGCTAGAAGAGCTTCACTCCATCGGTTCTTGG
CCAAGAGAAAGGATAGAGTTACGTCAAAGGCACCATACCAACTAAGCGATCCAGCCAAAGCGTCTTCAAACAACAACAACACCGTC
TCTTGGCTCGGTTTAGCAGCTCAAATATGACTGAACCACCACCGCGAACCTTACCGGGGCTATTCTTTCTGACGTTGCATCAATGA
ACAAGATTATATATAAAAAACCTTATGCGTTCATGATTCTCAACAACTATATATTCCAATTATTAGGAAACTTCATATATATTTTG
TATGTATTTGATTAATTCTTGTTAGTGTCTTTTCTTTTAGAAGGTGTTGTCTTATGTCTTTCTAAACACCCACTCTCTGGGTAAAT
CTCATAATTAGTAGATCTCGTATGTTACTGGTTTTGTAAGAAGAACAATTTTTGTTGAGGACTATACTAGTTTTATTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002890323 hypothetical protein ARALYDRAFT_472142 [Arabidopsis lyrata subsp. lyrata]6742e-068
NP_565096 protein TIFY 10B [Arabidopsis thaliana]6643e-067
AAM64554 unknown [Arabidopsis thaliana]6609e-067
BAJ33919 unnamed protein product [Thellungiella halophila]6528e-066
XP_002889001 hypothetical protein ARALYDRAFT_476633 [Arabidopsis lyrata subsp. lyrata]6276e-063

Swiss-Prot top hits (Blast detail)Scoree value
Q9S7M2 Protein TIFY 10B6641e-068
Q9LMA8 Protein TIFY 10A5961e-060
Q9C5K8 Protein TIFY 3B1928e-014
Q9LDU5 Protein TIFY 11A1892e-013

TrEMBL top hits (Blast detail)Scoree value
C6TEN6 Putative uncharacterized protein4196e-039
B9ST81 Putative uncharacterized protein3991e-036
A5C160 Putative uncharacterized protein3864e-035
Q3ED96 Uncharacterized protein At1g19180.23462e-030
B9RR74 Putative uncharacterized protein3183e-027

Arabidopsis top hits (Blast detail)Scoree value
AT1G74950.1 TIFY10B6641e-069
AT1G19180.1 JAZ1 (JASMONATE-ZIM-DOMAIN PROTEIN 1); protein binding5969e-062
AT1G19180.2 JAZ1 (JASMONATE-ZIM-DOMAIN PROTEIN 1); protein binding3593e-034
AT5G20900.1 JAZ12 (JASMONATE-ZIM-DOMAIN PROTEIN 12)1927e-015
AT1G17380.1 JAZ5 (JASMONATE-ZIM-DOMAIN PROTEIN 5)1891e-014

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
75  100%

Unigene MembersMember information