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Information for unigene UN25793

FASTA Sequence
Unigene ID: UN25793Length: 1182  SNP
AAAATCAAAATCGGCTTATAGGATTTATAAACATAGATCGTATTTCAGATCATGATACAAGACAAAAAAAAAGTTTTGAGACTTAA
TTAAAACATGTTTTGAAGTCAAGAAGTCGACCCGGAACCAGACCCCCTTTTGTACAGTTTGATTCTCCGACTTATCTCTTTCTCTA
GCTCTTCATCTCCTCCAACTTCCTCCAATTCCTTCGGTCCAAGAAACAGCCCATATGGCACACCATCGAATTTGTCTGTGTGATGC
AGCTGGTGAGCAGCGGCGACCCTTCGGAGATAAGGAACGTCAGCGATGGGACCTACAGGGAACCTCTTGTGCACCAAACCATCGTG
GACGAACATGTAGGCGATTCCAAACACTGTTATTCCTAACCCAGCGCCAAAGCAGAGGCCAGGAACGAGTCCCTTATTGAAGAAAC
CGTAAGAGAGGAGAGCAATGGCAGGAACAGCGTTGATTATGGCGAACACATCGTTCAACTCAAACGGCCCTTCTCTAGGTTTGTGA
TGTGACTCGTGCATGTTCCATAAAGAAGCGTGCCAGAGAGCTTTATGAGCCCATCTTGCCCAGAACTCCATGCCAACAGCAGCACC
AACAGAGAGAGCAAATGTACCGAACATCTCCGACATTGGGATCTCACCTCCCTCCATCTGCCAAGAGAATCTGTAGTAAACGGCCA
TAATAGCCATCGAAGTGATACCGAAGCTCGACATCACTGCAGCAATCAGATAAGTGAACCTCTCCGATTTCTTCCGCTCCAGCTTC
TCAGCTAAACGCAGCGCGAGGTACTCCGCGTCTATGGCTGTTGTTGTTGTCTCCGTGGTCTCGGGAGGACTGTCATCTTTGTCGAT
AGGAGAGCTCTGCCTCCGATCCGAGACGACGTAGCAGACGGATAATCCTCTGAACCGGAGGAGAGACGACGGGAATCCAGTTAATG
ATGTGGGGTGGTGTAGACAGAGACTGGAAGAGGAGGAAGAAGAGAAAGCGCGGTGGAGCGGTTTGAATGTAAGGGCTGTTGAGAGA
CCTGCCGCCATGGGAGAAGAAGAAGAAGTAGAAGAGGCTCCGAGACTTTGCTCGGCTGAGAGAGGTTATCTCAAACTTTGGTGAGG
TCTTACCTTTTTATGCGAGAGGGAAAGGAAGAGGGAGAGAGATGTGGTGTACAATGCTCTGTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ACS45170 beta-carotene hydroxylase [Brassica rapa subsp. pekinensis]14824e-162
AAS55552 putative beta-carotene hydroxylase [Brassica rapa]13598e-148
XP_002867597 beta-carotene hydroxylase [Arabidopsis lyrata subsp. lyrata]13482e-146
ABM54182 beta-carotene hydroxylase [Brassica napus]13453e-146
NP_194300 beta-carotene hydroxylase [Arabidopsis thaliana]13382e-145

Swiss-Prot top hits (Blast detail)Scoree value
Q01332 Beta-carotene hydroxylase2545e-021
P21688 Beta-carotene hydroxylase2482e-020
P54973 Beta-carotene hydroxylase2034e-015
Q44262 Beta-carotene hydroxylase2017e-015

TrEMBL top hits (Blast detail)Scoree value
C6KE02 Beta-carotene hydroxylase14823e-162
Q6QE72 Putative beta-carotene hydroxylase13596e-148
A8B8E2 Beta-carotene hydroxylase13452e-146
Q9SZZ8 Beta-carotene hydroxylase13382e-145
Q96297 Beta-carotene hydroxylase (Fragment)12816e-139

Arabidopsis top hits (Blast detail)Scoree value
AT4G25700.1 BETA-OHASE 1 (BETA-HYDROXYLASE 1); carotene beta-ring hydroxylase13575e-150
AT5G52570.1 BETA-OHASE 2 (BETA-CAROTENE HYDROXYLASE 2); carotene beta-ring hydroxylase11802e-129
AT4G25700.2 BETA-OHASE 1 (BETA-HYDROXYLASE 1); carotene beta-ring hydroxylase9032e-097
AT5G52570.2 BETA-OHASE 2 (BETA-CAROTENE HYDROXYLASE 2); carotene beta-ring hydroxylase4265e-042

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
113  38%
 
71  13%
 
183  38%
 
81  13%

Unigene MembersMember information