Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN25810

FASTA Sequence
Unigene ID: UN25810Length: 713 SSR 
AAAAGAGAAAACGAAAGACATACAGATTTGTGCAATCAAATGCAACAACCAGCTAGTGAAACGAACATGCCCTAAATGTCAGAGTT
GACATTCAAAAAGAAACAAAGAAAGTAAAATTTTCATCACACAAGTCCATGTATATATGATCCGGACTCTTCAATTACAGTTATTC
CATTAGTCATATTCCTTCTGAGAGTCTATATATGGATACGGAAGAAGGTAGATAAACATCACCACAAAGCACACTGTTCAACAACT
TTCAGAATATGAAATGCTATCCCAAACCCTATTGGGAATAGGTCCAACCGAACGTAACAGAGAGGCTTTAACTTGAGCGAATAAGG
CCGTGCAAGTAAGCCCCAGTCATCACGAGTGACACCATCGATACAACTCCCGCCGGGACTACTTTCCTCGTCCTTAAGTAACGCGA
TCCCATCATTCCTGTCAACGCTGCCGACCCCACTATACCAATGGAGGATGCCAATACAGGATTTTCTGGAAGCTCCTTGTAAACAT
AATAGAACAATGCAGCTGATCCTCCTCCGGCGACTACTGAGATTTTGCTTCCGCGTTTCAGGTAACCCATCAACCCACCAACTCCG
AGGAGAGAAGCATAAACAAGAGTGAACTTCTGAGACATAGATGACTCCATCTTCTTCTTCTTCTTCTTCTCTGTGTTCTCTGGATT
AGAAAAGCAAATGGAGGTGAGCTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002880770 hypothetical protein ARALYDRAFT_481481 [Arabidopsis lyrata subsp. lyrata]4955e-048
NP_180192 Transmembrane proteins 14C [Arabidopsis thaliana]4947e-048
XP_002516175 transmembrane protein 14, putative [Ricinus communis]3721e-033
XP_002309449 predicted protein [Populus trichocarpa]3575e-032
ABR17562 unknown [Picea sitchensis]3503e-031

Swiss-Prot top hits (Blast detail)Scoree value
O64847 UPF0136 membrane protein At2g262404943e-049
Q9P7G3 UPF0136 membrane protein P14E8.05c1243e-006

TrEMBL top hits (Blast detail)Scoree value
B9RR06 Transmembrane protein 14, putative3727e-034
B9HCN6 Predicted protein3574e-032
B8LPI2 Putative uncharacterized protein3502e-031
Q8LC37 Putative uncharacterized protein3413e-030
Q94A32 AT3g43520/T18D12_903413e-030

Arabidopsis top hits (Blast detail)Scoree value
AT2G26240.1 unknown protein4952e-050
AT3G43520.1 unknown protein3412e-032
AT1G50740.1 unknown protein1637e-012
AT3G20510.1 unknown protein1621e-011
AT1G33265.1 unknown protein1199e-007

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
91  14%
 
112  29%
 
104  57%

Unigene MembersMember information