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Information for unigene UN25831

FASTA Sequence
Unigene ID: UN25831Length: 1384 SSR 
AGTTTACAAAAAAAAATCAAAAGACGCGAAAAAAAGAAAGTGGAGATCAGGTGAATGAATCTACTCTCTACGCGTATTGAACGCCG
ACGCGGATTCTCTATCGACCTTTCGATCCACCGTACTGAGCCGCCGCCGCCGATTTGTATTTCAAATCGCGGAAGGGAGTATAATT
GATATGTATTAGTTGAAGTGGAGAGGAGAGAAGATAAAAATGATGGAAGTGGATGGATCCAACACTTCGATGAATCGTGCTCCTCC
TCCTCCTCCTCCTCAATCATCCTTCTTACGTTCCAGCCGATCCAAAGTATTGTATCAGTTTAAGCAGCAGAAACTAGCAGCTTGTA
AGCCAGTCTTAACTCCAACCTCGGTTATAACAGTGTTTATGTTGATGGGTTTTGTTTTCATTCCCATTGGCTTTGTTACTCTCCGT
GCTTCTCGTCATGCTATTGAAATTGTTGACCGGTATGATGTTGAGTGTATTCCTGAAGAATATAGAACCAACAAACTCTCTTACAT
TACAGACTCATCCATCTCTAAGAACTGTACTCGTTACTTAAAGGTACAAAAGCATATGAAAGCTCCCATTTTTATCTACTACCAGC
TTGATAACTACTATCAGAACCACCGCCGGTATGTAAAGAGTAGAAGTGATCAGCAACTGTTACACGGACGTGAGTATAGCCACACG
AGTGCTTGTGAACCCGAGGAGTCATCTAATGATGGTCTCCCCATTGTCCCCTGCGGGTTAATCGCTTGGAGTATGTTCAATGATAC
CTTTACCTTTGCTCAGCTGAAGGTGAGCCGGAACAACATTGCCTGGAAGAGTGACCGTGAGCACAAGTTTGGAAAGGATGTTTATC
CTTTCAATTTCCAGAACGGTTCTTTGGTTGGTGGAGCTAAGTTGGATCCTAAAGTTCCTCTAAGTGACCAAGAGGACTTTATTGTG
TGGATGCGAGCAGCTGCTCTACTAAGCTTCAGGAAACTATACGGAAGAATCGAAGAGGACTTGGAACCAGGGAGCGTTGTTGTGGT
GAATTTGTTCAACAACTACAACACTTATAGCTTTAGTGGGCAGAAGAAGCTTATTCTCTCCACGTCAAGTTGGTTAGGAGGAAGAA
ATGATTTTCTCGGTATCACATATATCGTCGTTGGTGCCTCTTCCATAGTTATATCCATCATCTTCATATTGCTCCATTTAAAAAAT
CCGAGGCCTTATGGAGACAATTCTTGGAACAAGAAAAGCCTTTCGAGTTGAGAAACTGTTACCATTCTTTCTCTAACATATTCCGA
TTCCAGGTTCATATATACATTACTCAAGAGCCTGTATATGTGATTCATATAGATATAGTGAGTATAGACCATTCTATGAAGCCTGT
AGTTGTAG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002863424 LEM3 (ligand-effect modulator 3) family protein [Arabidopsis lyrata subsp. lyrata]15775e-173
NP_568657 putative ALA-interacting subunit 2 [Arabidopsis thaliana]15741e-172
BAF00516 hypothetical protein [Arabidopsis thaliana]15686e-172
BAD44111 unknown protein [Arabidopsis thaliana]15678e-172
AAM63135 unknown [Arabidopsis thaliana]15623e-171

Swiss-Prot top hits (Blast detail)Scoree value
Q67YS6 Putative ALA-interacting subunit 215745e-174
Q9SLK2 ALA-interacting subunit 39804e-105
Q9LTW0 ALA-interacting subunit 19751e-104
Q8L8W0 ALA-interacting subunit 59222e-098
Q9SA35 Putative ALA-interacting subunit 48326e-088

TrEMBL top hits (Blast detail)Scoree value
B9T807 Putative uncharacterized protein13005e-141
B9HZN6 Predicted protein11132e-119
B8AKX4 Putative uncharacterized protein11105e-119
Q10CF0 LEM3 family/CDC50 family protein, expressed11105e-119
B4FVA7 Putative uncharacterized protein10551e-112

Arabidopsis top hits (Blast detail)Scoree value
AT5G46150.2 LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein15753e-175
AT5G46150.1 LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein15753e-175
AT1G54320.1 LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein9803e-106
AT3G12740.1 ALIS1 (ALA-INTERACTING SUBUNIT 1); phospholipid transporter9751e-105
AT1G16360.1 LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein9364e-101

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  25%
 
102  50%
 
191  25%

Unigene MembersMember information