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Information for unigene UN25871
| FASTA Sequence |
| Unigene ID: UN25871 | Length: 883 |
SSR | | TACTTTCTCAGAAGAATGTGCATGCCATGACTTACAAACTTGAACAAAAGAAAAACAGGAAAGAACAATTCTTACAAGAACAGAGA
ACACAAGGGAAGATTACTACCTTGGTTGGTAGGTCAAACACAGCACAGTGGGTGTGGTGTTCACTTGAAAGTGGAGAGACGGGGAA
GCTTGTCCCTCAGGTAGTAAAGCTTTGCTCTTCTCACTTTTCTGTGACTCACCACTTTTATCTCTTTGATGTTGGGAGAGTATAAG
GGAAACACGATTTCAACACCGATACCAGCAATAATCCTGCGAATACGAATGGTAGTGTGTATGCCAGCGTTTTGTCTAGACATCAC
AATGCCTTTGTAGATAGACAACCTACGTCTGTTCTCAGGAACTTCCAGTTTGATCTCAACGATATCTCCAGTCCTGATTTCAGGAA
CAGGTCTCACTTTCTCTGATACCTCAATTGCTTTCTGGTTCAGTATCCCCATTACGTCTCCCAGCTTGACTCTCGGCTTTCTTGGA
GCTTTGGCTTCATCAGATTCTACTACATCTTCCACATTATCCTCAGTAGCAGCGTTAGCATCAACAGCTTCACCTTCCCTTCACCT
TCACCTTCACCTTCACCTTCACCTTCACCTTCTGCTCTAACTAGAACCTCTCGTCTCGCCTTAGTATCGAGCGAGAAGCTAGATTT
GGAGTGGCTCAGTGAAAGCCTTGAGATCGATAGAATGGGATTCATCGAAGGTGCGCATGATAGAAACGACGAAAACCCTAGTTTCT
TCGATGGCTGCGTCAGTATCATATGCAATGCCTGAGGAGGAAGAAGAAGATGAGAGCTCGTCGCCATGGTTATCACTCTCTCTCAG
TTGGTCGGAGGAGTTGGAGATCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| ABD65070 plastid ribosomal protein L19, putative [Brassica oleracea] | 688 | 3e-070 |
| ACF23041 ST10 [Eutrema halophilum] | 634 | 6e-064 |
| ABD64915 plastid ribosomal protein L19, putative [Brassica oleracea] | 625 | 7e-063 |
| XP_002870097 ribosomal protein L19 family protein [Arabidopsis lyrata subsp. lyrata] | 625 | 7e-063 |
| NP_567531 50S ribosomal protein L19-1 [Arabidopsis thaliana] | 624 | 9e-063 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8W463 50S ribosomal protein L19-1, chloroplastic | 624 | 4e-064 |
| Q8RXX5 50S ribosomal protein L19-2, chloroplastic | 590 | 3e-060 |
| P82413 50S ribosomal protein L19, chloroplastic | 558 | 2e-056 |
| B8HT34 50S ribosomal protein L19 | 239 | 2e-019 |
| Q2RJV3 50S ribosomal protein L19 | 235 | 5e-019 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q2A9H1 Plastid ribosomal protein L19, putative | 688 | 2e-070 |
| B4YYC4 ST10 (Fragment) | 634 | 4e-064 |
| Q2A9V6 Plastid ribosomal protein L19, putative | 625 | 5e-063 |
| A5B2A3 Putative uncharacterized protein | 591 | 4e-059 |
| C6T030 Putative uncharacterized protein | 590 | 5e-059 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G17560.1 ribosomal protein L19 family protein | 625 | 3e-065 |
| AT5G47190.1 ribosomal protein L19 family protein | 591 | 2e-061 |
| AT4G11630.1 ribosomal protein L19 family protein | 355 | 6e-034 |
| AT5G11750.1 ribosomal protein L19 family protein | 353 | 9e-034 |
| AT1G24240.1 ribosomal protein L19 family protein | 351 | 2e-033 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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