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Information for unigene UN25875
| FASTA Sequence |
| Unigene ID: UN25875 | Length: 1764 |
SSR | | TATGGGTTTAAAATTGCGGCTTGGCTCAGTTCGGATCACAGACAATTTAGGTACAACTTAAAATCGGTAATCCTTGCCAAAAACGG
TGTCAAAATATTCCCACTCGCTGCACTAATCTTCTTTCCATCATTTCTTTATTATTCACTTCACTCCAACAACAAGTAATATAATC
ATCAGGCAGGAACTGGCCTCGCACCAGAAGAAAGCTGTAGATTGGCAGCGTATTCACGCGCCCACAAGTCATAGTGAACAATCTCT
TCAAGCGACGGCGATGTTACCAACTCGCTTCGATGTTTATCGCATGTTAACTCCACCACCTTGAAGATATCCAAATAGCTTATCTT
TTCATCAATGAACATTTCAACAGCTTTCTCGTTAGCAGCACTGAGAACACCGGTCATAGTACCTCCAGCTCGTCCCGCAGCATAAG
CAAGATCCATTGATGGGTATTTCACATTGTCTGGTTTCTTGAAAGTCAACGAACCCAGTTTGCAAGGGTCAAGTCTTGGCCAAGTT
ACTTCGGAACAAGGAACTCTATCGGGCCATGACATGGTGTAGAGAATCGGCAAACGCATATCAGGCCATCCCAGTTGAGCAAGCAC
AGATGAATCCTGTGTTTCAATCATGGAGTGTATGATACTCTGAGGGTGAATAACAATCTCTATATCGTCATACTCAGCTCCAAACA
AATAATGAGCTTCAATGACCTCAAGGCCCTTGTTGAAAAGCGTAGCCGAGTCGACTGTTATTTTCTTTCCCATGTTCCAGTTAGGA
TGCTTCAACGCATCTGCTACTTTAACTTCCTTGAGCTTTTCAACAGGCCAATCTCTAAAAGCTCCACCAGATGCAGTCAAGATTAT
CTTGCGCAAAGCGCTTTCAGGCAAACCTTGAATACACTGAAATATAGCTGAATGTTCTGAATCAGCAGGAAGAATCTTAACGTTAT
GTTTGTTGGCAAGTGGAAGGACGAAGGGACCACCTGCGATTAATGTCTCTTTGTTTGCAAGAGCAATGTCCTTTCCCGCTTCAATT
GCAGCGACCGTAGGCTTAAGTCCTGCGCAACCTACTATTCCGGTAACAACAGTTACAGCGTCAGGGTGACGAGCAACCTCAACCAC
TCCTTGCTCCCCAGGAATGATCTCAGGTTTATAGTCCAAACCGGCTAAAGCCTCTTTAAGCTCAGTGACCAATGACTCATTTCTAA
CAGCAACCAGTGCAGGTTTAAATCTCTTCACCTGATCAGCAAGGAGAGCAACATTAGAGCCAGCAGCTAGAGCGACGACTCTAAAT
TTGTCAGGATTCTCAGCCACAATATCCAAGGTCTGGGTGCCAATAGAACCAGTAGAACCGACGATGGAGATGGGTTTAGGTCCATC
CCAAGATTGACGAGGAGGCTCGGGAACAGCTCTCCCAGGCCACGCTGGAGGAGGAGGAGGTTGTTGCTGCTGCTGCTGCACTTTCA
CTGAACACTTGACTCCTTTTCCAACAAAACCTCTCCCTTGAGTCCTCTTCTTCCTCAAACTAAACCCACCTGGAAGTTTGGGGGTT
TGGTTGAACCTGGAAGTATCCAAGAAAGAAAGAGAGATGGATTCAGCTGGAGAGAGTGAGTTAAGTGTCATCATCAGTCAAAAATC
TTTTCAAAAAATTCGAATATTTTCCAGAGAACCCCACTAAGTTTTTAGTAAAACTCTCGATGATGGAGGGAGAGAAAGAACAAACA
TAAACAGTGAGACAGAGAGAGAGATGATAAGAAAGAAGAATATC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_201085 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Arabidopsis thaliana] | 2291 | 1e-255 |
| XP_002866510 1-deoxy-D-xylulose-5-phosphate reductoisomerase [Arabidopsis lyrata subsp. lyrata] | 2272 | 2e-253 |
| ABO38177 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Croton stellatopilosus] | 2032 | 1e-225 |
| AAK96063 1-deoxy-D-xylulose-5-phosphate reductoisomerase [Solanum lycopersicum] | 2025 | 8e-225 |
| CAB43344 1-deoxy-d-xylulose-5-phosphate reductoisomerase [Arabidopsis thaliana] | 2022 | 2e-224 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9XFS9 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic | 2291 | 5e-257 |
| Q8W250 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic | 2006 | 6e-224 |
| Q9XES0 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic | 1951 | 1e-217 |
| B1WNP5 1-deoxy-D-xylulose 5-phosphate reductoisomerase | 1374 | 1e-150 |
| B0CD21 1-deoxy-D-xylulose 5-phosphate reductoisomerase | 1367 | 7e-150 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A4L795 1-deoxy-D-xylulose 5-phosphate reductoisomerase | 2032 | 9e-226 |
| Q947C3 1-deoxy-D-xylulose-5-phosphate reductoisomerase | 2025 | 6e-225 |
| Q703F3 1-deoxy-D-xylulose 5-phosphate reductoisomerase | 2008 | 5e-223 |
| B9I3A1 Predicted protein | 2006 | 9e-223 |
| Q0JRD4 Os01g0106900 protein | 2006 | 9e-223 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G62790.1 DXR (1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE); 1-deoxy-D-xylulose-5-phosphate reductoisomerase | 2317 | 4e-261 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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