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Information for unigene UN25876
| FASTA Sequence |
| Unigene ID: UN25876 | Length: 1389 |
SSR | | ACTGAAATCAGAACAAATGTTAATGCAATTATTAGTAATCCTGCTGGAAATTACAGGGATATTATTATGAAAAATCCTTTGAGCAA
AGACTGGTAGCCTCAACAAGAAGCCAGCGAAGGAAAACTGATTCAGTAGTCCTTAGAGAATTCAAAACACACTATGTCTCCTTCAA
GGTGGATAGATATCAAAGCCAAGTTAACGCAAACAAGAATGTGCTTATTTAGCGGCTTCAAGTGCAGAGGCTCCAGAGATAATCTC
GATAAGCTCTGTTGTGATAGAAGCTTGACGAGTCCTGTTGTAAGTTAGGGTGAGACGGTCAAGCATTTCTCCTGCGTTTCTGCTTG
AGCTGTCCATGGCAGACATCCTAGCTCCCATCTCACTACACGCATTCTCCAGCACCGCATTGAACATTACACAAGAGAACTGGAAC
TCGGCCAGATTCTGCAGGATTTCTCCCTTTGTTTCACCACCTTCAATCTCGTATGAGTCGAGCTCACCGAGCTTTCCTCCCACTTC
AGACTCCTTCTCAATAATCTCAGGTGACAAAACAGTGGCCACAGTCGGTAGAAATGCGACGACAGAATGGAACTTGTTGTAAACAA
TGCGCAAAGCATCGAACTCAACGTTCTTCAGGATGTCATCAGCTAAAACTGAGACCTGAGCATAGTTGAGTGGGTTCTTATTCAGC
TCTGTAACAGTAAGGGAAATGTCGTTCTTTGAGTCACGAAACATTATAGCCTTTGCTTTCTCCCCGACAATAACAAACTTTACGTC
CTTTTCAGGACCAGCATTCAACTTGTAAAGAGCCCTGCTCACTTTAACAACGGTGGAGTTAATTCCACCACAGAGACCCTTGTCAG
AAGAGAGAGTAACCACTACACTCTTCTTCACATCAATGCTGGGATTATCTCCAAGAAGAGCAGTAAAAGGCTGCCAAAGTCCACGA
GAGTTCTCAGCTCTGCCTTGAACAGCTCTTAGCTTGGAAGCAGCGACCATCTTCATGGCCTTTGTGATCTTTTGGATGTTTTTCAC
ACTCTTCATCCGGTTACGCACAACTTGAGTTGAGATAGAACGAACTCCAAGAGGTCCTTCCTCCTGGTCAGAAGAGAGAGGAGATC
GGATGGCGGCGATTGGGCGAGCGGCGATTGAGGGAGGAGACGCCTCCCTTCGCGACGGAAAACAGCCATTGCCATTGCTCACAGAT
CAGGGGTGGTCTTCTTCTTCTTCTTCTTCTTCTCGACTCGGATGATACAGGCAGGTAGATTCGAGGGCTCGTAATGACTGCTACTG
GGCGAAGCGAAACCAAGGGCTTTGTTTGACAGAACAACACACACTCTCACTTCGGATGCGGCGTCGTTTTTTAGGATGATGACTAC
CAAAATTTCTCCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_180863 ATP synthase subunit gamma [Arabidopsis thaliana] | 1494 | 2e-163 |
| AAM96955 mitochondrial F1-ATPase, gamma subunit (ATP3_ARATH) [Arabidopsis thaliana] | 1491 | 5e-163 |
| XP_002881258 gamma subunit of mitochondrial F1-ATPase [Arabidopsis lyrata subsp. lyrata] | 1491 | 5e-163 |
| BAE98585 mitochondrial F1-ATPase, gamma subunit [Arabidopsis thaliana] | 1490 | 7e-163 |
| XP_002531492 ATP synthase f1, gamma subunit, putative [Ricinus communis] | 1275 | 6e-138 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q96250 ATP synthase subunit gamma, mitochondrial | 1494 | 1e-164 |
| P26360 ATP synthase subunit gamma, mitochondrial | 1245 | 7e-136 |
| B8IN02 ATP synthase gamma chain | 449 | 1e-043 |
| Q4FP37 ATP synthase gamma chain | 449 | 1e-043 |
| A1B8N9 ATP synthase gamma chain | 446 | 3e-043 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q7GB12 ATP synthase gamma chain | 1494 | 2e-163 |
| Q8L7F2 ATP synthase gamma chain | 1491 | 3e-163 |
| Q0WWB3 ATP synthase gamma chain | 1490 | 5e-163 |
| B9SZS3 ATP synthase gamma chain | 1275 | 4e-138 |
| C6T8L7 ATP synthase gamma chain | 1260 | 2e-136 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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