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Information for unigene UN25894
| FASTA Sequence |
| Unigene ID: UN25894 | Length: 858 |
SSR | | GCACGTCGTTGGAGAAGAGAAGAGGACTATGCTCTCATTCAACCTCCTCTGGTTTCATCCCGTTTTCATTCCCTCTATTTCATCAC
TCGTCCCCACCACTCTTTCTTCCAACCGCCCATTTCAGCCTTCTCTGCAACCGCCCCTTGTTCGCCGTCATCATCATCATCATCAT
CATCATCATCATCATCTTCTACTTACTTCGCGAGTGAAGAAGAAGAAGACGATGAATTCTCCACCGTCGTTCGTCGCCGCTTTGAC
TTCTCTCCGCTTCTAAAATTCCTCTCCAGATTCGGACCAGTCGAATTGGTTTTGGAGCCGGTCAATTTGGAACCAACGCCGGCGGT
TACGCTTGATCCGGTGGAGTTGGAGCTGGCCGAGTCATACGAGGCGGTTCCGGCGCCCTACTGGCACTCACTACTAAAATCGTTAT
GCTCATCGAGGTCATCCCTCGGTTTAGCTTACGCCGTCGTCTCTTGGCTGGAAAAGCACAATCTCTGCTTCTCTTATGAGCTTCTC
TACTCGATTCTCATACACGCGCTCGGCCGTTCCGAGAAGCTCTACGAGGCCTTTCTTCTTTCTCAGAAGCAAACCTTAACTCCTCT
CACATACAATGCTCTGATTGGAGCTTGTGCTCGGAACAATGACATCGATAAGGCTCTTAATCTCATTTCTAGGATGCGTCAAGGTG
GTTACCAGTCCGATTTTGTTAACTACAGTTTGGTTATTCAGGCTTTGACACGTAGCAACAAGATTGATTCCGCTCTTTTGCACAGC
CTTTATCGAGAAATCAAACATGACAAGCTTGAGCTTGATGTGCAGCTAGTTATGATCTCATCATGGGCTTTGCTAAGTCTGGTG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002865541 pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] | 1022 | 6e-109 |
| NP_199046 pentatricopeptide repeat-containing protein [Arabidopsis thaliana] | 1001 | 2e-106 |
| BAB10204 maize crp1 protein-like [Arabidopsis thaliana] | 800 | 3e-083 |
| XP_002306972 predicted protein [Populus trichocarpa] | 746 | 6e-077 |
| CAN83144 hypothetical protein VITISV_040783 [Vitis vinifera] | 722 | 4e-074 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8L844 Pentatricopeptide repeat-containing protein At5g42310, mitochondrial | 1001 | 7e-108 |
| Q9CAN5 Pentatricopeptide repeat-containing protein At1g63080, mitochondrial | 127 | 2e-006 |
| TrEMBL top hits (Blast detail) | Score | e value |
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| B9H5G7 Predicted protein | 746 | 4e-077 |
| A5BE32 Putative uncharacterized protein | 722 | 3e-074 |
| B9R8M0 Pentatricopeptide repeat-containing protein, putative | 709 | 8e-073 |
| B9GQ20 Predicted protein | 701 | 7e-072 |
| Q84ZD2 Os07g0548300 protein | 264 | 3e-021 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G42310.1 pentatricopeptide (PPR) repeat-containing protein | 1001 | 7e-109 |
| AT1G63080.1 pentatricopeptide (PPR) repeat-containing protein | 127 | 1e-007 |
| AT1G63070.1 pentatricopeptide (PPR) repeat-containing protein | 112 | 8e-006 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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