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Information for unigene UN25896

FASTA Sequence
Unigene ID: UN25896Length: 1587 SSR 
TTCTTCTTCTTTGATTGATTCAGATTCATCCTCCCCGGCGAGAAAGCTTTGTGCTTCCTATCAACAAGTGAGTTTCCGATTCCCTC
TTCTTCTGAAATTGAAATTGAGATGGGCTTTGACAAGCAAGCTTCTAGCTCCTCCTCCTCCTCCTCCTCTTATACCCTTAAAATGC
CACCACCTCCTAGGGAGGACACGCCTCTTCTCGGCAAAGGGCCTCCTCTTTCTAGCCAGTTCAAGACCTTCGCCAACATCTTCATT
GCTGTCGTCGGCGCTGGTGTTCTTGGTCTTCCTTACGCCTTCAAGCGCACCGGATGGCTCATGGGCGTCCTCCTTCTCCTCTCCGT
CTCTGTTTTGACCCATCACTGCATGATGCTCCTCGTTTATACCCGCCGCAAGCTCGACTCTCTCAACGGTGGTGGTTTCTCCAAGA
TCGGATCTTTTGGTGACCTTGGCTTTGCCGTCTGCGGCTCCCTCGGCAGGCTCGTCGTTGACCTTTTTATTATTTTGTCTCAAGCT
GGCTTTTGTGTCGGCTATCTTATCTTCATCGGCACTACTCTAGCTAATCTTTTCGATCCTGATTCCCCCACCAGTCTCAGCCATCA
GTTTACACGCCTCGGCTCTGACTTCTTTGGCGTCTCCTCTAAGAGTCTCTACATCTGGGGATGCTTCCCCTTCCAGCTTGGTCTCA
ACTCCATCAAGACCCTCACTCACTTGGCTCCTCTCAGCATCTTCGCCGACCTTGTTGATCTTGCCGCTATGGCTGTCGTCATTGTT
GAGGATTCCATGATTATACTCAAGCAAAGGCCTGACGTTGTTGCCTTCGGTGGTATGTCCCTCTTCTTCTATGGGATGGGCGTGGC
CGTTTATTCTTTCGAAGGCGTTGGAATGGTATTGCCTCTTGAATCGGAGATGAAAGACAAGGACAAGTTTGGCAAAGTCTTGGCAC
TCGGCATGGGATTCATCTCTTTCATATACATAGCCTTTGGTTTCTTAGGTTACTTGGCTTTTGGTGAGGACACAATGGACATCATC
ACCGCTAACTTGGGGGCAGGACTTATCAGCACTATTGTTCAGCTTGGACTCTGCATCAACCTCTTCTTCACCTTCCCCTTGATGAT
GAATCCGGTGTTTGAGATAGTAGAGAGGCGGTTCTCGGGTGGGATGTACTCTAGATGGCTGCTAGTATTGGCAGTGACTCTGGTGG
CTCTCTTTGTGCCAAACTTTACAGATTTTTTGTCATTGGTGGGGAGCAGCACTTGCTGCATCTTAGGGTTTGTGTTACCTGCTTTG
TTTCATTTGCTGGTGTTCAAGGAAGAGATGGGGTGGAAGCAATGGAGCCTGGACATGGCGATAGTGGGACTGGGAGTGGTTCTTGC
TGTGTCGGGAACTTGGAGTTCCCTGAGTGAGATCTTCTCGGTCAAAGTGTAATTTAATGTGAGAGGTTTTTCACTTGTGTCCAATT
ACGTGTGACGTGTGAACCATTATATATGTGTATATGGGTTGTGGTTTAAGAGAATCTGAAACTGTGATTGTAATTGTATGTTGATG
ATGATGGTTGGAATAAAAGACATGAGCGCTGTTTTCTCG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002866789 hypothetical protein ARALYDRAFT_490589 [Arabidopsis lyrata subsp. lyrata]20491e-227
AAM65327 putative amino acid transport protein [Arabidopsis thaliana]20266e-225
NP_195538 Transmembrane amino acid transporter family protein [Arabidopsis thaliana]20222e-224
XP_002328275 aromatic and neutral amino acid transporter [Populus trichocarpa]15687e-172
XP_002312799 aromatic and neutral amino acid transporter [Populus trichocarpa]15687e-172

Swiss-Prot top hits (Blast detail)Scoree value
Q4KL91 Proton-coupled amino acid transporter 44052e-038
Q4V8B1 Proton-coupled amino acid transporter 33873e-036
Q8CH36 Proton-coupled amino acid transporter 43749e-035
Q811P0 Proton-coupled amino acid transporter 32951e-025
Q8BHK3 Proton-coupled amino acid transporter 22734e-023

TrEMBL top hits (Blast detail)Scoree value
Q8LAI4 Putative amino acid transport protein20264e-225
Q9SVG0 AT4g38250/F22I13_2020221e-224
B9HPX3 Aromatic and neutral amino acid transporter15685e-172
B9MZ05 Aromatic and neutral amino acid transporter15685e-172
Q8GXJ5 Putative uncharacterized protein13052e-141

Arabidopsis top hits (Blast detail)Scoree value
AT4G38250.1 amino acid transporter family protein20235e-227
AT2G42005.1 amino acid transporter family protein16005e-178
AT5G65990.1 amino acid transporter family protein9089e-098
AT3G11900.1 ANT1 (AROMATIC AND NEUTRAL TRANSPORTER 1); amino acid transmembrane transporter/ aromatic amino acid transmembrane transporter/ neutral amino acid transmembrane transporter3291e-030
AT3G28960.1 amino acid transporter family protein1354e-008

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
61  20%
 
81  20%
 
211  20%
 
181  20%
 
121  20%

Unigene MembersMember information