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Information for unigene UN25917
FASTA Sequence |
Unigene ID: UN25917 | Length: 740 |
SSR | | GGACGATTCCCAAAAAAAATGGCTCTTGTTCAATCCACAGCTCTTGCTAACTTCAACGTCCGGTTATCGCCGGTTCTATCCACACT
CCAAGCTCCGTCGTCTCTCTTCCTCCGGAGGGAAATCCGTCCTTTAACCTCTCCGTTGTCGTCCTCCTCCTCCTCCACCGCTGGGA
GCTTGTCCTTGTCGCCGTTGGCGCATCAGCGGAAGCCTCTCTGCCCTCCGCCTCGCGGCAAGTTTGTTAGAGAAGATTATCTTGTG
AGGAAACTGTCAGCTGAAGAACTTCAGGAGCTGGTGAAAGGAGAGAGGAAGGTGCCGCTGATTGTTGATTTTTATGCAACTTGGTG
TGGACCTTGTATCTTGATGGCTCAGGAACTCGAAATGCTTGCAGTAGAGTATGAGAGCAATGCAATGATTGTGAAAGTTGATACAG
ATGATGAGTACGAGTTTGCACGCGACATGCAGGTTCGAGGCTTACCTACATTGTTATTCATCAGTTCTGACCCAAGCAAAGATGCA
ATCAGGACAGAAGGGCTAATCCCAATACAAATGATGCGCGATATCATCGACAACGACATGTGAAGTCTTGTATCCGGAAGAAAACA
CTTTCTTGCTTTAGGATTTGAATAGTTGTTATGTGGGTTTTTTGAGGATGCGGTGAGAAGAATGTCATCTAGTTTCATAAGAAAAA
TGTAAACGAATGTAATCTTGGAATTTATATGTATGCAGTGTTATTTTCGGTC
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GenBank top hits (Blast detail) | Score | e value |
XP_002882489 hypothetical protein ARALYDRAFT_477988 [Arabidopsis lyrata subsp. lyrata] | 761 | 8e-079 |
AAM61520 thioredoxin, putative [Arabidopsis thaliana] | 758 | 2e-078 |
NP_187329 thioredoxin-like protein CITRX [Arabidopsis thaliana] | 754 | 5e-078 |
BAH57034 AT3G06730 [Arabidopsis thaliana] | 591 | 4e-059 |
XP_002264063 PREDICTED: hypothetical protein [Vitis vinifera] | 583 | 4e-058 |
Swiss-Prot top hits (Blast detail) | Score | e value |
Q9M7X9 Thioredoxin-like protein CITRX, chloroplastic | 754 | 2e-079 |
Q8H2V6 Thioredoxin-like protein CITRX, chloroplastic | 494 | 3e-049 |
Q7M1B9 Thioredoxin | 179 | 1e-012 |
P07591 Thioredoxin M-type, chloroplastic | 169 | 2e-011 |
O51088 Thioredoxin | 168 | 2e-011 |
TrEMBL top hits (Blast detail) | Score | e value |
C6T262 Putative uncharacterized protein | 572 | 5e-057 |
B9GLZ3 Predicted protein | 571 | 6e-057 |
A9P8W8 Putative uncharacterized protein | 569 | 1e-056 |
Q6JE37 Thioredoxin protein | 566 | 2e-056 |
Q9LKW0 Putative thioredoxin | 563 | 5e-056 |
Arabidopsis top hits (Blast detail) | Score | e value |
AT3G06730.1 thioredoxin family protein | 768 | 6e-082 |
AT1G43560.1 Aty2 (Arabidopsis thioredoxin y2); electron carrier/ protein disulfide oxidoreductase | 163 | 8e-012 |
AT1G50320.1 ATHX; enzyme activator | 158 | 3e-011 |
AT3G15360.1 TRX-M4 (ARABIDOPSIS THIOREDOXIN M-TYPE 4); enzyme activator | 139 | 5e-009 |
AT1G76760.1 ATY1 (ARABIDOPSIS THIOREDOXIN Y1); electron carrier/ protein disulfide oxidoreductase | 136 | 1e-008 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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