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Information for unigene UN25921
| FASTA Sequence |
| Unigene ID: UN25921 | Length: 1199 |
SSR | | ACCAAGTATTATGTCTCATTAGAAAACTCTTAACACTCAAGAGTGTAGAGAAAACATTTCACAAGAAAAATACTACGCCACAAACT
TTGGGAAAAAACAAAACCAAACCCTGGTTGCAGAAACCACATACTAAGATACATCGAATTAATCATGCTCGTCTTAATACATTAAT
AAAAGAAGAATGAAACCCGATCAGAATTTAAAAACCAAAAAAAAAAAAAAAAGAAAATAACAACGAATCTCACAGATATATTGTTT
GTGTGTGTTTTATCGTCTAGGAATGATGACTTGTGCTTCCATCTTCTTGATGGCTGTGATGATGATCTCCGTCGCGGTTTTGCTGG
TTCGCCGTCTCCTGAACCGGCCGGTAAGCCGCGTTCAACGCCCCTAAAACTCCATAATGGTTTTGTTCCCCACCTCCTCCTCCGTA
ACCAGACGGCAAAGGCTGTCCGGAAAACAAAGCAATGGGAGCTGCAAAATTCATGAGATGTACTCCTGCTCCTCCTCCACCACCAC
CACCGTTTGTGTTGTAAACGTCAGCGGAATGATGAGGGTTGATATTAAAAGCCCATAGATTCTGCGTATAATCACCACTACTCCAA
AACGGTGCCGTAGCAGGAGTCTGACTCGTAGCTAAAGATCCTGCCGTTGATTGTACTAAATAGTTTCCCATTTGGTTGTGATCTAA
AAGCTGTGAAGAAGAAGAAGAAGAAGAAGAATGTGACTCGTTCTTGGGACGCACCTGATGATGATGAGCCATATTAGGCGAATGAA
AGTAGTAGCTGCTCGGAGTTGTACGAAGATGAGCAGCAGAGAGAGAAGATCTTGAGCTACGAAGTGAGATATTAAGAGAAGTGAAG
TTAGCCGGTATGGTTCCAGTCCCTGTAGCGGCTATAACCGCCGGTTCAGCTTGCTGTAGAAGCCACTCGATGGTTTCGCCGTCGGA
TTTATGACCTAGCTCACGTGTGAGCTGAAAGACACGTGCTGCGCACATGGCGGGCATACGGATCCTACGGCCTCGGCCTTCTACTT
TGGTGTGTCTGTCCTTTGTTGAGGTTCGCTTAGGAGGTGGTTTTTTGGAGAGAGCGTTAGGGTCGGAGTTAGGTTCGGAAGAAGAA
GCTGATGGGATGATGGCTAAGGAAGTGGAAGAGGAGGAAGAAGAATCAAGAAGCTGGAGAGGGAAGTTCGGTCTGTGATCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_564973 transcription factor TCP15 [Arabidopsis thaliana] | 1262 | 1e-136 |
| XP_002887250 hypothetical protein ARALYDRAFT_476101 [Arabidopsis lyrata subsp. lyrata] | 1196 | 7e-129 |
| BAJ34416 unnamed protein product [Thellungiella halophila] | 1118 | 7e-120 |
| CBI15239 unnamed protein product [Vitis vinifera] | 592 | 7e-059 |
| XP_002274026 PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] | 522 | 1e-050 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9C9L2 Transcription factor TCP15 | 1362 | 2e-149 |
| Q93Z00 Transcription factor TCP14 | 435 | 5e-042 |
| Q9C7G4 Transcription factor TCP22 | 402 | 3e-038 |
| Q9C518 Transcription factor TCP8 | 398 | 1e-037 |
| Q9LQF0 Transcription factor TCP23 | 394 | 3e-037 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B5G4Z3 BHLH (Fragment) | 473 | 3e-045 |
| Q70I19 TCP-domain protein | 469 | 9e-045 |
| B9S8T6 Putative uncharacterized protein | 466 | 2e-044 |
| B7ZYZ0 Putative uncharacterized protein | 465 | 3e-044 |
| B4FQS4 Putative uncharacterized protein | 458 | 2e-043 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G69690.1 TCP family transcription factor, putative | 1363 | 1e-150 |
| AT3G47620.1 AtTCP14 (TEOSINTE BRANCHED1, CYCLOIDEA and PCF (TCP) 14); transcription factor | 435 | 4e-043 |
| AT1G72010.1 TCP family transcription factor, putative | 402 | 3e-039 |
| AT1G58100.1 TCP family transcription factor, putative | 398 | 9e-039 |
| AT1G35560.1 TCP family transcription factor, putative | 394 | 3e-038 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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