Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN25941

FASTA Sequence
Unigene ID: UN25941Length: 1197 SSR 
GGACGAGCGAGTCGCCGGTTTCGCATCGCTTCAGGACTCAGGAGTCAGAACTCATAAGCACCAAACTCAGCCCCAATGTCTCACTG
AGTCCACCCGGGGTGCTTCGTATTCCAAGTTCTATCTTGTTCCATCGTCCTCTCGTATTTTCGTTTCTAATTGTAATGCAATCGTT
GCAGAAACCCTAATTTCGGAGGGTTGTGTAAAAAGTAGCAATGGTTAAAAACGCAATTAGTGATGGTGAGTGGACAGTGGTCTTAC
CTAGTAAACGAAGACATGGGAAAATAAAACCTAAACCTAAGATTCAGGAAGAAGAAGAAGAAGAAGAGGAAGAAGAAGAAGAGAAG
CCGTGGAAGTCTGATGATCTTGAAGTTGATCCCCAAAGGCAAGCAAGAGTAAAGCAGAAGATGGAAAACTCTATCAAGAAAGTCGA
GAGCTCAAAATTCTACGCAGCATTCTTAGAAAAGCTCAAATGCCCCGAGGTTTCGGACCAGTTTCGCCTGGTGTTAGGTGACGAAA
CACAGCTTCAGATGGTTATGTACGGTATAGGAAGCATCGAGTCTTACGAATCTCCAAGGTTTCAGCTCAGCGTTGCAATCTTGATG
AAGAGGGAGTTTGAATGGGTTGGTAACATTGAAGTGTTCGATCCGGTCCTCTCGGTGACTGAATCTAGTGTCTTGGAATCTCTGGG
GTGTACTGTTTTGTCTGTGAACGAGCAAGCTCGTAGGGAAGCTTTGAAGCCTACTCTTTTCTTCATGCCGCACTGTGAGGCTAATC
TGTATAGCAACCTGTTGCAAGCGAACTGGAGGATGGATCGGTTGCGCAGGATTGCATTGTTTGGGAACAGCTTTCAGATGTATGAG
GAGCAGGTGACGTTTAAACCGAATGTCATCCGTGCTACCAAACGGATCATAGCTGCACGGGGATTCACTAGTGAGTTTGCTATTGA
GACTGTATCTGATGATTATTTTCCAGCGTTCCATGATTCGAGCTGGCATTTTTTCAGCCCCGGTTTAGATTCGGAGCTGCCATTGT
TGGTTTCAGAGGGATTATAGATCATTGCTTTTTTGCACTTGTCAGGTCTTTGTGTTTGTCTATCCTCTTCCTGCATAAGTTTAACC
ATTTGAAGTTGTTGACTTATCATTGGTTTAATATTTGCTTGAAACAATGAAATATGTTATCACAAATTTTCATAATCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002866338 sensitivity to red light reduced protein 1 [Arabidopsis lyrata subsp. lyrata]11241e-120
NP_200764 sensitivity to red light reduced protein [Arabidopsis thaliana]11223e-120
AAY62602 sensitivity to red light reduced protein 1 [Arabidopsis thaliana]11187e-120
AAY62603 sensitivity to red light reduced protein 1 [Arabidopsis thaliana]11152e-119
XP_002304791 predicted protein [Populus trichocarpa]7943e-082

Swiss-Prot top hits (Blast detail)Scoree value
Q8GWZ6 Protein SENSITIVITY TO RED LIGHT REDUCED 111264e-122
Q8K2M3 SRR1-like protein2393e-019
Q9UH36 SRR1-like protein1953e-014
Q9VEB5 SRR1-like protein1381e-007

TrEMBL top hits (Blast detail)Scoree value
Q24JI3 At5g5956011222e-120
Q4PRK8 Sensitivity to red light reduced protein 111185e-120
Q4PRK7 Sensitivity to red light reduced protein 111151e-119
B9GWW7 Predicted protein8076e-084
B9S4K4 Protein SENSITIVITY TO RED LIGHT REDUCED, putative7663e-079

Arabidopsis top hits (Blast detail)Scoree value
AT5G59560.1 SRR1 (SENSITIVITY TO RED LIGHT REDUCED 1)11263e-123
AT5G59560.2 SRR1 (SENSITIVITY TO RED LIGHT REDUCED 1)11263e-123

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
122  67%
 
101  33%

Unigene MembersMember information