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Information for unigene UN25954

FASTA Sequence
Unigene ID: UN25954Length: 978 SSR 
GAGAAGGCAAGTGAAGAGCTTACATTATTGGATGATAAAAAATAATCAGGTGCAAGTCTAGGAAGCAAAAGAAATCGAGTAATCGT
GGAATATATATACAGATCAAAATGCAAACAAGAATACAAATACTTGGTTACTACTTCTGTTTTGTTTTTTTTTTAAAAGACTACAA
ACAACAGATTCCTCCTTTTCTTGAGGAAAACAAACAAGTGGAGAGCTAGCTACTTCAATCCTCATGTTGGTTTCTCTTTGGAATCA
CAATATAGAACAACCTTTCTGAGACTTTCTCTTCTTCCTCTTCTTGTTCTTGGGTGGTTGGAGAACTACCTTGATAGCCGCATCAA
ACACCGCTTTTACATTCTGTTGTGTTTTTGCACTGCATTCAATATAAGCAGGTGCCCCAATGAGCTTCTTCAGTTCTTCACCCTGA
GCAGTAGAGATAGGCACAGCACCAGGGTGCTCAACCAAGAATTGCTTGTCATCTCGAAGATCAAGCTTGGTTCCAACGAGGATGAT
TGGTACACCAGGAGCATAATGTCTCAGTTCAGGTACCCACTTTTTAGAAACATTTTCATAGCTAGCTTTGCTGACGAGAGAGAAGG
CAAGTAAGAAGACATCTGCACCTCGATAGCTCAAAGGTCTTAGTCTATTGTAGTCTTCTTGTCCTGCAGTATCCCACAATCCCAAG
TTGATAGTGTTTCCATCCACAATCACATTGGCGCTGAAATTATCAAACACAGTAGGCACGTAATCCGTGGGGAAAGTGTTGCTAGT
GTAGGAGATGAGCAGACAAGTCTTTCCAACAGCGCCATCGCCGACTGTGACACACTTTATAAACCTTGAAGCACTCATCTCTCTCT
CAAATTTCAAACCCTAAAACTTTTCAAGATTTGGGGATTATTTTTGTAATGGAGAGAAGAGAGAGAGAGAGAGAGAGAGACTGTGA
GGTTCTTAAAGAGGTACAAGACAACGCAATCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_195228 Rac-like GTP-binding protein ARAC3 [Arabidopsis thaliana]10121e-107
AAO42256 putative Rho1Ps homolog Rac protein [Arabidopsis thaliana]10092e-107
AAB97458 rac-like small GTP binding protein [Brassica rapa subsp. campestris]10083e-107
AAB38780 Rho1Ps homolog [Arabidopsis thaliana]10057e-107
XP_002278633 PREDICTED: hypothetical protein isoform 2 [Vitis vinifera]9771e-103

Swiss-Prot top hits (Blast detail)Scoree value
Q38912 Rac-like GTP-binding protein ARAC310125e-109
Q6EP31 Rac-like GTP-binding protein 59542e-102
O04369 Rac-like GTP-binding protein RAC19472e-101
Q39435 Rac-like GTP-binding protein RHO19418e-101
Q38902 Rac-like GTP-binding protein ARAC19345e-100

TrEMBL top hits (Blast detail)Scoree value
Q5PNX9 At4g3502010127e-108
O49180 Rac-like small GTP binding protein10082e-107
A5AP72 Putative uncharacterized protein9778e-104
B9SXU8 Rac gtpase, putative9742e-103
B9H198 Predicted protein9634e-102

Arabidopsis top hits (Blast detail)Scoree value
AT4G35020.1 ARAC3 (ARABIDOPSIS RAC-LIKE 3); GTP binding / GTPase10133e-110
AT2G17800.1 ARAC1; GTP binding9382e-101
AT2G17800.2 ARAC1; GTP binding9382e-101
AT1G75840.1 ARAC5 (RAC-LIKE GTP BINDING PROTEIN 5); GTP binding / GTPase9311e-100
AT3G51300.1 ROP1 (RHO-RELATED PROTEIN FROM PLANTS 1); GTP binding / GTPase activating protein binding / GTPase/ protein binding9311e-100

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
85  100%

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