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Information for unigene UN25977
| FASTA Sequence |
| Unigene ID: UN25977 | Length: 738 |
SSR | | GGGGCTGCAAAGCCCCACACTTTTCCTGATTCTTCTGTGTCAATTTCTCCAAATCGGTACCGAATTGGTGCATCTTCGATCCCATT
CTTCAAAGATCTCACAATCATGCTTTCTTTATCCTCTTCTTCTTCTTCTTCTTTGCTTCGTCCAAGTTTACACTTCCATTCTTCTC
CCGACCAATCCGTTGCTATGTCTAGAAGGAGTATTAGCTCGTTCCGTCGGAAAGTCCCTTGCTGTTCCATAGCCACTAAATTCGAT
AGTCTATCAAAGTCAGGAGGAGGTTTGCGAGAGCCTGGGGATGATTCTGATGTTCTTATAGAATGTCGAGATGTCTACAAATCATT
TGGGGATAAACATATCTTGAAAGGTGTTTCCTTTAAGATTAGACATGGCGAGGCTGTTGGGGTGATTGGTCCTTCTGGGACTGGAA
AATCAACCATTTTAAAGATCATGGCTGGTCTTCTTGCTCCCGACAAGGGAGAGGTTTATATACGAGGAAAAAAAACGAGCTGGTTT
GATAAGTGATGAGGAGATATCAGGGCTTCGTATTGGCCTTGTTTTTCAGAGTGCAGCTCTCTTTGATTCTCTTACAGTTCGTGAAA
ATGTTGGCTTTCTACTCTATGAAAATTCTAAAATGTCTGAGAATCAAATATCTGAGCTTGTGACACAGACCTTGGCAGCTGTTGGT
TTGAAGGTGTTGAGATCGACTACCTTCTGAGCTATCTGGTGGGATGAAGA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002886917 ATNAP11 [Arabidopsis lyrata subsp. lyrata] | 404 | 2e-037 |
| AAC27147 Contains similarity to ABC transporter gb|1651790 from Synechocystis sp. gb|D90900 [Arabidopsis thaliana] | 396 | 2e-036 |
| NP_564850 protein triGALACTOSYLDIACYLGLYCEROL 3 [Arabidopsis thaliana] | 396 | 2e-036 |
| ABD72483 ABC transporter II-like protein [Gossypium barbadense] | 341 | 4e-030 |
| XP_002512620 abc transporter, putative [Ricinus communis] | 338 | 9e-030 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9AT00 Protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic | 396 | 8e-038 |
| Q5Z0P5 Aliphatic sulfonates import ATP-binding protein SsuB 1 | 176 | 3e-012 |
| Q5X627 Spermidine/putrescine import ATP-binding protein PotA | 169 | 2e-011 |
| Q5ZWE4 Spermidine/putrescine import ATP-binding protein PotA | 169 | 2e-011 |
| Q5WXF0 Spermidine/putrescine import ATP-binding protein PotA | 166 | 4e-011 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B0KYV3 ABC transporter II-like protein | 341 | 3e-030 |
| B9RFV1 Abc transporter, putative | 338 | 6e-030 |
| C6TD59 Putative uncharacterized protein | 336 | 1e-029 |
| B9IA02 Predicted protein (Fragment) | 335 | 1e-029 |
| C5X5U1 Putative uncharacterized protein Sb02g011310 | 330 | 5e-029 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G65410.1 ATNAP11 (ARABIDOPSIS THALIANA NON-INTRINSIC ABC PROTEIN 11); transporter | 396 | 8e-039 |
| AT5G64840.1 ATGCN5 (A. THALIANA GENERAL CONTROL NON-REPRESSIBLE 5); transporter | 131 | 4e-008 |
| AT4G33460.1 ATNAP13; transporter | 130 | 5e-008 |
| AT5G39040.1 ATTAP2; ATPase, coupled to transmembrane movement of substances / transporter | 128 | 9e-008 |
| AT2G13610.1 ABC transporter family protein | 127 | 1e-007 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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